Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0618
         (812 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0734 + 27648661-27649596                                         30   1.9  
12_01_0387 - 3028922-3029689,3032116-3032832                           30   2.5  
07_01_0535 + 3952066-3952986                                           29   3.3  
03_05_0333 + 23245139-23245224,23245527-23245633,23246372-23247282     29   3.3  
12_02_0766 - 22982606-22983288,22984352-22984706                       29   5.8  
08_01_0437 + 3850137-3850581,3851134-3851159                           28   7.7  

>04_04_0734 + 27648661-27649596
          Length = 311

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
 Frame = -1

Query: 575 KASRMRPASCKYVFGLFSPSDGSPRTD--------CALQLGPPPTPAVALRSMPNCGEG 423
           K +R +  +CK VF  +    G   +         CA    PPP+PA  L+ +P C  G
Sbjct: 170 KRTRFQCPACKKVFRSYQALGGHRASHMRGGRGGCCAPPPNPPPSPATPLQPLPECDGG 228


>12_01_0387 - 3028922-3029689,3032116-3032832
          Length = 494

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +1

Query: 433 QFGIDRSATAGVGGGPS*RAQSVRGLPSLGENKPKTYLQLAG 558
           QFG D  A AG GGG         GLP   +  P ++L  AG
Sbjct: 418 QFGSDHFAFAGHGGGGGGGVSLTLGLPHGADQTPASFLIGAG 459


>07_01_0535 + 3952066-3952986
          Length = 306

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/72 (25%), Positives = 33/72 (45%)
 Frame = -3

Query: 720 ENCQYEDKHQSRQLRPVAHRHQYHQDAPEKILYDLQE*DFKS*ERDEHEGQQDATGELQV 541
           + CQYEDK    Q +   +    +QD  +KI    +E + +  E    + Q +    L+ 
Sbjct: 127 QQCQYEDKKVPNQCKDEENTPGQYQDEEQKIAKQCKEEEEEEEENALEKYQDEEHKSLKA 186

Query: 540 RLRFVLSERRQP 505
           + +   +ER+ P
Sbjct: 187 QHQCQDTERKAP 198


>03_05_0333 + 23245139-23245224,23245527-23245633,23246372-23247282
          Length = 367

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 202 SACGSSGQSRETTWTCPGLRQIPRHNVCDS--KFIWSIRRMCYGARKAQSGYRLRRAVLH 375
           SA  ++   R  T    G R+  +  V D+  + +  +RR+ YG R+  SG RL R  L 
Sbjct: 104 SAAAAAPTGRPGT-VAAGTRRAGKKAVLDAGGRRVGHLRRLSYGVRERGSGRRLTR--LG 160

Query: 376 SCITDIRVQYTMG 414
            C+T+  V +  G
Sbjct: 161 WCMTEFGVDHGGG 173


>12_02_0766 - 22982606-22983288,22984352-22984706
          Length = 345

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +1

Query: 169 CALYPHSWRTVSACGSSGQSRETTWTCPGLRQIPR 273
           C  YP +W  +  C   G+S+   W    +  + R
Sbjct: 170 CIGYPPAWEKIKICSGHGRSKHGAWRVYAMSDVGR 204


>08_01_0437 + 3850137-3850581,3851134-3851159
          Length = 156

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 458 VALRSMPNCGEGTVRPIVYCTRMSVIQL*RTARRKRYP 345
           V LRS P CG    R +V+C     +Q    ARR+R P
Sbjct: 12  VQLRSHP-CGPPMGRTMVWCLHQDSVQRCAHARRRRRP 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,824,732
Number of Sequences: 37544
Number of extensions: 519532
Number of successful extensions: 1744
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)