Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0617
(709 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.8
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.0
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.0
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 22 6.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 8.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 8.7
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 2.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 410 LRSVLSEHHPVQDVVPSEADVHRDLAVSGRKYRMAGVTFHVVVG 279
+R LS P+Q P + + + L VS MAGV + V+G
Sbjct: 810 VREKLSSSQPMQ---PPQQNPYMFLPVSYMSTTMAGVIYPPVIG 850
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 560 SADGKPAHKDLGLFYGSSYFCGPDGVKCP 646
+AD KP K F GP+G+K P
Sbjct: 1119 TADNKPQLKPQKPFTSPGGIPGPNGIKMP 1147
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/45 (20%), Positives = 22/45 (48%)
Frame = +1
Query: 166 DEKHSDILWNTAVVISDTGNVIGKHRKNHIRESAILTNPTTTWKV 300
DE+ + I + ++ G++ G +K H ++ + +W+V
Sbjct: 112 DERPNSIHQRASFSLNTDGDIAGLRKKKHKVNPLLMQSGMGSWEV 156
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+R+RE S+EP N NY N + Y K+ NI
Sbjct: 70 RRERERSKEPKIVSSLSNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+R+RE S+EP N NY N + Y K+ NI
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+R+RE S+EP N NY N + Y K+ NI
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+R+RE S+EP N NY N + Y K+ NI
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+R+RE S+EP N NY N + Y K+ NI
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+R+RE S+EP N NY N + Y K+ NI
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+R+RE S+EP N NY N + Y K+ NI
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+R+RE S+EP N NY N + Y K+ NI
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/50 (22%), Positives = 27/50 (54%)
Frame = +3
Query: 9 PRVVEHALRVLHKGEAAVVRVCRIS*RRADHDLPSGTRHQVRNGDRVLDI 158
P+ +++ +R KG+ + + S ++ H LP+G R + + + L++
Sbjct: 37 PKGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPTGFRKVLVHNVKELEV 86
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+ +RE S+EP + + SN Y N + Y K+ NI
Sbjct: 70 RTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+ +RE S+EP + + SN Y N + Y K+ NI
Sbjct: 70 RTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+ +RE S+EP + + SN Y N + Y K+ NI
Sbjct: 70 RTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+ +RE S+EP + + SN Y N + Y K+ NI
Sbjct: 70 RTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+ +RE S+EP + + SN Y N + Y K+ NI
Sbjct: 70 RTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+ +RE S+EP + + SN Y N + Y K+ NI
Sbjct: 70 RTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+ +RE S+EP + + SN Y N + Y K+ NI
Sbjct: 70 RTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+ +RE S+EP + + SN Y N + Y K+ NI
Sbjct: 70 RTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 399 NGAEIVFNPSATIAGEGGSEYMWNVEARNAAITN 500
+G +I+ S+ I +EY+W V + I N
Sbjct: 352 SGIKIIKQISSNIYERQNNEYIWIVSNKYQKIAN 385
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+ +RE S+EP + + SN Y N + Y K+ NI
Sbjct: 303 RTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNI 346
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 222 KRDRETSQEPHPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 353
+ +RE S+EP + + SN Y N + Y K+ NI
Sbjct: 303 RTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNI 346
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -3
Query: 113 RRKVVVGPSSADSANSHHGCFSLVQNAKG 27
RR ++ S H CF V+N KG
Sbjct: 542 RRNAATWKNAVRHNLSLHKCFMRVENVKG 570
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,489
Number of Sequences: 438
Number of extensions: 4395
Number of successful extensions: 36
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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