Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0616
         (478 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0234 - 6116931-6117052,6117549-6118369,6118573-6118601,611...    27   5.9  
10_06_0120 - 10979458-10979665,10979909-10980585,10981315-109815...    27   7.8  

>09_02_0234 -
           6116931-6117052,6117549-6118369,6118573-6118601,
           6118711-6119020,6119469-6119476,6120104-6120232,
           6120341-6120445
          Length = 507

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 149 TPDGEWSPSLIEFQIFKKKDYFYAHQSYFRIKLK*CFYNFVCDKF 283
           T  G++  +L  + I K +DY Y      RIK+K       CD F
Sbjct: 414 TDAGQFRKALKSYHIVKGRDYKYTRNKADRIKVKCSQDKVKCDFF 458


>10_06_0120 -
           10979458-10979665,10979909-10980585,10981315-10981538,
           10981763-10982136,10982203-10982786
          Length = 688

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +2

Query: 134 RRAYGTPDGEWSPSLIEF-QIFKKKDYFYAHQSYFRIKLK 250
           RR  G PD     SL+EF Q F +K+       Y+R  +K
Sbjct: 336 RRIPGQPDSSKKDSLVEFMQNFLEKETMMPRNRYWRTPVK 375


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,665,307
Number of Sequences: 37544
Number of extensions: 177634
Number of successful extensions: 327
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)