Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0616
         (478 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.32 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   1.3  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    22   2.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   6.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   6.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   6.8  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   9.0  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   9.0  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 25.4 bits (53), Expect = 0.32
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 315 VHHHVNSFQISISKNLVHIRQIHCSGC 395
           VHH  +SF     + L  + ++H  GC
Sbjct: 76  VHHFESSFNAQSWQRLTSLHELHVHGC 102


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 474 QHYINSFPYLLFIMITYLSFIYNRS 400
           +++  +FP   FI+I Y  F+Y  S
Sbjct: 5   KYFGKNFPSTSFILINYFIFLYFNS 29


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 429 TYLSFIYNRSTYNQSNEFAECEPNFLILKFEMN 331
           T L  + NR+     N FA CE   L L  + N
Sbjct: 37  TSLEELANRNAIQSDNVFANCELQKLRLLLQGN 69


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 34  HKSFSITVTINAAK 75
           HK F+  +TINA K
Sbjct: 497 HKPFNFHITINADK 510


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 34  HKSFSITVTINAAK 75
           HK F+  +TINA K
Sbjct: 497 HKPFNFHITINADK 510


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 6/18 (33%), Positives = 15/18 (83%)
 Frame = +2

Query: 410 YINDKYVIIMNSK*GKLL 463
           YIN +Y++++++K  K++
Sbjct: 372 YINREYILVLSNKMQKMV 389


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 6/18 (33%), Positives = 15/18 (83%)
 Frame = +2

Query: 410 YINDKYVIIMNSK*GKLL 463
           YIN +Y++++++K  K++
Sbjct: 372 YINREYILVLSNKMQKMV 389


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 6/18 (33%), Positives = 15/18 (83%)
 Frame = +2

Query: 410 YINDKYVIIMNSK*GKLL 463
           YIN +Y++++++K  K++
Sbjct: 372 YINREYILVLSNKMQKMV 389


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -2

Query: 459 SFPYLLFIMITYLSFIYNRSTYNQSNEFAECE 364
           S  ++  I +  + FIY+  T  Q  +   CE
Sbjct: 6   SIMFIHSIFLILIIFIYSNETIAQVTDDENCE 37


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -2

Query: 459 SFPYLLFIMITYLSFIYNRSTYNQSNEFAECE 364
           S  ++  I +  + FIY+  T  Q  +   CE
Sbjct: 6   SIMFIHSIFLILIIFIYSNETIAQVTDDENCE 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,510
Number of Sequences: 438
Number of extensions: 2288
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)