Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0615
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    25   2.6  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   4.6  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   4.6  

>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 134 EAGNIPDSAGRSHPCLEQVNVKPT 205
           +AGN+P SA  S  CL+Q+  + T
Sbjct: 71  KAGNLPKSAKLSDGCLKQMVARVT 94


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 508 FTHQTNTYIHFLGARSKTCTFNKINILIDH*IC 410
           + H T  Y   LGA  + CT N  N +  H  C
Sbjct: 165 YYHFTVEYYTVLGAACQVCTPNATNTVWSHCQC 197


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 508 FTHQTNTYIHFLGARSKTCTFNKINILIDH*IC 410
           + H T  Y   LGA  + CT N  N +  H  C
Sbjct: 165 YYHFTVEYYTVLGAACQVCTPNATNTVWSHCQC 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,826
Number of Sequences: 2352
Number of extensions: 7649
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)