Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0615
(776 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456795-1|CAG33076.1| 533|Homo sapiens PHGDH protein. 48 4e-05
BC032110-1|AAH32110.3| 322|Homo sapiens PHGDH protein protein. 48 4e-05
BC011262-1|AAH11262.1| 533|Homo sapiens phosphoglycerate dehydr... 48 4e-05
BC001349-1|AAH01349.1| 533|Homo sapiens phosphoglycerate dehydr... 48 4e-05
BC000303-1|AAH00303.1| 533|Homo sapiens phosphoglycerate dehydr... 48 4e-05
AL589734-3|CAI22409.1| 499|Homo sapiens phosphoglycerate dehydr... 48 4e-05
AL589734-1|CAI22407.1| 533|Homo sapiens phosphoglycerate dehydr... 48 4e-05
AL139251-2|CAI22213.1| 499|Homo sapiens phosphoglycerate dehydr... 48 4e-05
AL139251-1|CAI22212.1| 533|Homo sapiens phosphoglycerate dehydr... 48 4e-05
AF171237-1|AAD51415.1| 533|Homo sapiens 3-phosphoglycerate dehy... 48 4e-05
AF171236-1|AAD51414.1| 405|Homo sapiens 3-phosphoglycerate dehy... 48 4e-05
AF006043-1|AAB88664.1| 533|Homo sapiens 3-phosphoglycerate dehy... 48 4e-05
>CR456795-1|CAG33076.1| 533|Homo sapiens PHGDH protein.
Length = 533
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308
>BC032110-1|AAH32110.3| 322|Homo sapiens PHGDH protein protein.
Length = 322
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 61 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 97
>BC011262-1|AAH11262.1| 533|Homo sapiens phosphoglycerate
dehydrogenase protein.
Length = 533
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308
>BC001349-1|AAH01349.1| 533|Homo sapiens phosphoglycerate
dehydrogenase protein.
Length = 533
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308
>BC000303-1|AAH00303.1| 533|Homo sapiens phosphoglycerate
dehydrogenase protein.
Length = 533
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308
>AL589734-3|CAI22409.1| 499|Homo sapiens phosphoglycerate
dehydrogenase protein.
Length = 499
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 238 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 274
>AL589734-1|CAI22407.1| 533|Homo sapiens phosphoglycerate
dehydrogenase protein.
Length = 533
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308
>AL139251-2|CAI22213.1| 499|Homo sapiens phosphoglycerate
dehydrogenase protein.
Length = 499
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 238 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 274
>AL139251-1|CAI22212.1| 533|Homo sapiens phosphoglycerate
dehydrogenase protein.
Length = 533
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308
>AF171237-1|AAD51415.1| 533|Homo sapiens 3-phosphoglycerate
dehydrogenase protein.
Length = 533
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308
>AF171236-1|AAD51414.1| 405|Homo sapiens 3-phosphoglycerate
dehydrogenase protein.
Length = 405
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 144 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 180
>AF006043-1|AAB88664.1| 533|Homo sapiens 3-phosphoglycerate
dehydrogenase protein.
Length = 533
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137
++ VI+ PHLGASTKEAQ R G+EIA Q V++VK
Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,368,948
Number of Sequences: 237096
Number of extensions: 1135962
Number of successful extensions: 2663
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2663
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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