BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0615 (776 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CR456795-1|CAG33076.1| 533|Homo sapiens PHGDH protein. 48 4e-05 BC032110-1|AAH32110.3| 322|Homo sapiens PHGDH protein protein. 48 4e-05 BC011262-1|AAH11262.1| 533|Homo sapiens phosphoglycerate dehydr... 48 4e-05 BC001349-1|AAH01349.1| 533|Homo sapiens phosphoglycerate dehydr... 48 4e-05 BC000303-1|AAH00303.1| 533|Homo sapiens phosphoglycerate dehydr... 48 4e-05 AL589734-3|CAI22409.1| 499|Homo sapiens phosphoglycerate dehydr... 48 4e-05 AL589734-1|CAI22407.1| 533|Homo sapiens phosphoglycerate dehydr... 48 4e-05 AL139251-2|CAI22213.1| 499|Homo sapiens phosphoglycerate dehydr... 48 4e-05 AL139251-1|CAI22212.1| 533|Homo sapiens phosphoglycerate dehydr... 48 4e-05 AF171237-1|AAD51415.1| 533|Homo sapiens 3-phosphoglycerate dehy... 48 4e-05 AF171236-1|AAD51414.1| 405|Homo sapiens 3-phosphoglycerate dehy... 48 4e-05 AF006043-1|AAB88664.1| 533|Homo sapiens 3-phosphoglycerate dehy... 48 4e-05 >CR456795-1|CAG33076.1| 533|Homo sapiens PHGDH protein. Length = 533 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308 >BC032110-1|AAH32110.3| 322|Homo sapiens PHGDH protein protein. Length = 322 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 61 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 97 >BC011262-1|AAH11262.1| 533|Homo sapiens phosphoglycerate dehydrogenase protein. Length = 533 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308 >BC001349-1|AAH01349.1| 533|Homo sapiens phosphoglycerate dehydrogenase protein. Length = 533 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308 >BC000303-1|AAH00303.1| 533|Homo sapiens phosphoglycerate dehydrogenase protein. Length = 533 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308 >AL589734-3|CAI22409.1| 499|Homo sapiens phosphoglycerate dehydrogenase protein. Length = 499 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 238 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 274 >AL589734-1|CAI22407.1| 533|Homo sapiens phosphoglycerate dehydrogenase protein. Length = 533 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308 >AL139251-2|CAI22213.1| 499|Homo sapiens phosphoglycerate dehydrogenase protein. Length = 499 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 238 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 274 >AL139251-1|CAI22212.1| 533|Homo sapiens phosphoglycerate dehydrogenase protein. Length = 533 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308 >AF171237-1|AAD51415.1| 533|Homo sapiens 3-phosphoglycerate dehydrogenase protein. Length = 533 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308 >AF171236-1|AAD51414.1| 405|Homo sapiens 3-phosphoglycerate dehydrogenase protein. Length = 405 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 144 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 180 >AF006043-1|AAB88664.1| 533|Homo sapiens 3-phosphoglycerate dehydrogenase protein. Length = 533 Score = 48.0 bits (109), Expect = 4e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +3 Query: 27 IIQQPAVIATPHLGASTKEAQVRVGQEIAEQLVNLVK 137 ++ VI+ PHLGASTKEAQ R G+EIA Q V++VK Sbjct: 272 LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVK 308 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 74,368,948 Number of Sequences: 237096 Number of extensions: 1135962 Number of successful extensions: 2663 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2584 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2663 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9423020542 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -