Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0611
(754 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52003| Best HMM Match : BTB (HMM E-Value=1e-16) 52 4e-07
SB_22259| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_10641| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_19212| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_20852| Best HMM Match : PC_rep (HMM E-Value=1.8e-13) 31 1.0
SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) 31 1.0
SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10) 31 1.3
SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 30 2.3
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 29 3.1
SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31) 29 4.1
SB_58196| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-10) 28 7.1
SB_50622| Best HMM Match : Omega-toxin (HMM E-Value=3.1) 28 7.1
SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_56638| Best HMM Match : DAGK_cat (HMM E-Value=7.8e-19) 28 7.1
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 28 7.1
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034) 28 7.1
SB_49951| Best HMM Match : Pellino (HMM E-Value=4.1e-08) 28 9.4
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 28 9.4
SB_6733| Best HMM Match : 7tm_1 (HMM E-Value=9.6e-36) 28 9.4
SB_46453| Best HMM Match : DUF947 (HMM E-Value=0.13) 28 9.4
>SB_52003| Best HMM Match : BTB (HMM E-Value=1e-16)
Length = 501
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/64 (43%), Positives = 36/64 (56%)
Frame = +3
Query: 273 MSEACNSNAEDSRTVCKYGEKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNP 452
MSE ++D + +CKYG KCY+KNP H ++Y+H FE K GK K NP
Sbjct: 28 MSEGKRKRSKDEKPLCKYGSKCYRKNPVHMEEYRHLSDT-FFE--TIKKQGKYMWK--NP 82
Query: 453 YSSD 464
Y SD
Sbjct: 83 YLSD 86
>SB_22259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 41.9 bits (94), Expect = 5e-04
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 297 AEDSRTVCKYGEKCYQKNPEHHKKYKHP 380
++ + VC YG KCYQ NP+H K + HP
Sbjct: 295 SDRKKKVCMYGSKCYQTNPDHMKNFLHP 322
>SB_10641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 33.1 bits (72), Expect = 0.25
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Frame = -3
Query: 551 LYCSLMYQI-HFLIR-FRFFISYFMLLSRFVIAR-IWIKTFFSELSGILLIFFLKSS 390
LY SL Y+I F+ R + FFIS F SRF++ R WI F+ ++ ILL+FF S
Sbjct: 110 LYYSLSYRIGKFVGRSYLFFISLFGDFSRFLLCRHTWI---FALINLILLMFFALES 163
>SB_19212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 31.9 bits (69), Expect = 0.57
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +3
Query: 108 YLFCFQHLLFVYLYLDDSPLSLINEKH*QNCDLNSRQTYLLIYHFFSFWNYLFEAMS 278
+++ FQ +L V+++ D S IN K ++++R+ YLL+ FF F+N L MS
Sbjct: 275 FVWLFQKILAVFVFKDRS----INSKV---VNIDNRRCYLLLSFFFFFFNILVGLMS 324
>SB_20852| Best HMM Match : PC_rep (HMM E-Value=1.8e-13)
Length = 638
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 343 KKIPSTTKNTNIQGKQELLRKKMRRIPES-SEKNVLIHIRAMTNLLSSIK*EIKNLNRIR 519
K P + + + +LL++++ + E E+NV +H A+ L S I+ ++ +
Sbjct: 24 KDEPKREEEVELSEEDKLLQEELTMLVERLKERNVSLHKPALEALRSQIRASTSSMTSVP 83
Query: 520 KWIWYIREQYSS 555
K + ++R Y+S
Sbjct: 84 KPLKFLRPHYAS 95
>SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)
Length = 1552
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2
Query: 594 SFSAWIGLTVSIFTTVLLSDVPDPFSNSIQVF 499
SFSA GLT+ I +L D+PDP + IQVF
Sbjct: 624 SFSA--GLTLGIDIDAMLEDLPDPSNLRIQVF 653
>SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 330 EKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNP 452
+K Y K + KK K+P +KKN KN K+ E NP
Sbjct: 246 KKDYGKKKNYSKKKKNPKNNKYNKKKNRKNSKKINECASNP 286
>SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10)
Length = 260
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +3
Query: 327 GEKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKP 506
G K + K E HK +K A EKK EK K + F+P++ DD P K KP
Sbjct: 189 GSKEFPK--ESHKPFKVKKDKKA-EKKAEKKEEKPADDDFDPFAEDDTPKAAPK---PKP 242
Query: 507 E 509
E
Sbjct: 243 E 243
>SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05)
Length = 720
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Frame = +3
Query: 357 HHKKYKHPGQAGAFEKKNEKNPGKLREKRF------------NPYSSDDKPAKQHKVGDK 500
HHK +KH G + + K+ GK R + N + +KP K HK K
Sbjct: 126 HHKHHKHMGTSHRIPSRERKSHGKKRLNKHKKASHTRRNNHKNSRRTHNKPGKNHKSATK 185
Query: 501 KPES 512
K +S
Sbjct: 186 KEKS 189
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 330 EKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQ 482
E+ Q E+ K+Y+ Q +KK + KLRE N +DD+ ++
Sbjct: 717 EEIKQMGEENEKRYEEEKQKIEDDKKRWEEERKLREDEINQMFNDDQEKRE 767
>SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31)
Length = 491
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 346 KIPSTTKNTNIQGKQELLRKKMRRIPESSEKNVLIHIRAMTN 471
K+ S+ + + K+++ K+M IP ++N +H+ A+TN
Sbjct: 15 KLRSSKRFDDRVSKRKINEKEMLGIPSQHQRNKTVHLEAVTN 56
>SB_58196| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-10)
Length = 334
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 141 IQIISVESKINNHLFCTFMISYYLCGLN 58
+ ++S S IN F T M Y++CGLN
Sbjct: 251 VGVLSATSTINPSGFLTRMAVYWICGLN 278
>SB_50622| Best HMM Match : Omega-toxin (HMM E-Value=3.1)
Length = 320
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 363 KKYKHPGQAGAFEKKNEKNP--GKLREKRFNPYSSDDKPAKQHKVGDKKPE 509
+K + G +++N++N G+ ++K NP+ S P + V + +PE
Sbjct: 174 EKSEQEGAESCEQEENDENGDGGQRKDKSNNPWQSGTAPTQDEPVNEPEPE 224
>SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1221
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +3
Query: 282 ACNSNAEDSRTVCKYGEKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKL--REKRFNPY 455
A N++ E V + E QK P +A EK +EKNPG + EK
Sbjct: 634 AGNTSKESPDQVMESDEPNPQKMDTKGVAASDPVKASEVEKGSEKNPGNVPKDEKPQGKT 693
Query: 456 SSDDKPAKQHKVGDKKPESN 515
S + ++H DK E +
Sbjct: 694 ESANPSEEEHNKEDKPQEKD 713
>SB_56638| Best HMM Match : DAGK_cat (HMM E-Value=7.8e-19)
Length = 836
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 536 MYQIHFLIRFRFFI-SYFMLLSRFVIARIWIKTFFSELSGILLIFFLKSSCLPWM 375
M Q F IR F+ S F L S +WI S SG + FF+ SCLP M
Sbjct: 60 MVQCGFRIRIPGFLYSGFQLKSWIPDPSLWISDSSSMDSGFQVSFFM-DSCLPVM 113
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 399 EKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPESN 515
EKK++K K+ EK+ + DDK + K DKK +S+
Sbjct: 159 EKKDDKK--KVDEKKEDEKKDDDKKVDEKKEDDKKNDSS 195
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -3
Query: 515 IRFRFFISYFMLLSRFVIARIWIKTFFSELSGILLIFFL 399
++F+ F++YF + F++ + + SE S IL F+L
Sbjct: 565 VKFKVFLTYFRYIGVFIVIFVMLLFILSESSLILSRFWL 603
>SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)
Length = 605
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 408 NEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKP 506
N+ N G LRE + + + DKPA Q K KP
Sbjct: 318 NKANHGTLREWQLILHGTKDKPAHQQKEHPDKP 350
>SB_49951| Best HMM Match : Pellino (HMM E-Value=4.1e-08)
Length = 208
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +1
Query: 313 LYANTAKSVIKKIPSTTKNTNIQGKQELLRKKMRRIPESSEK 438
+++ ++ + +PST ++TN +GK+E LR +R P ++ +
Sbjct: 154 VFSGASQCKHENVPST-EHTNSRGKRECLRMLLRDTPSTTRR 194
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 318 CKYGEKCYQKNPEHHKKYKHPGQAG 392
C+ G C+ P+ H+ HPG G
Sbjct: 368 CQNGGTCFNVGPDQHRCQCHPGYTG 392
>SB_6733| Best HMM Match : 7tm_1 (HMM E-Value=9.6e-36)
Length = 398
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = -2
Query: 609 VMFLGSFSAWIG------LTVSIFTTVLLSDVPDPFSNSIQVFYLLLYAA*QVC 466
++ L SFS G + VS+ TT L VPD F S+ V LL+ Q C
Sbjct: 19 LIILNSFSIGFGTCGNILVLVSVATTASLQTVPDLFIGSLAVADLLVVMVQQPC 72
>SB_46453| Best HMM Match : DUF947 (HMM E-Value=0.13)
Length = 943
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 268 KRCQKLVIQMLKIRELYANTAKSVIKKIPSTTKNTNIQGK 387
KRC + ++++ L+A T K VIK+ S T N N+ G+
Sbjct: 788 KRCPRDILRLHNQSFLHAITLKEVIKETKSLT-NRNLYGR 826
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,813,781
Number of Sequences: 59808
Number of extensions: 419419
Number of successful extensions: 1240
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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