Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0610
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    26   0.30 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    26   0.30 
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    24   1.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.7  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 226 LYHIIPFLRSLPSYTYRLSRNPSISS*VYLFLYILPHS*LALSYQPHFHFVSSHVHTI 53
           L +I   L++  S+   L RN S+   VY+ LYIL    LA  +      V+   +T+
Sbjct: 114 LQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYILATVFLAYVWICEMGVVTLQAYTL 171


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 226 LYHIIPFLRSLPSYTYRLSRNPSISS*VYLFLYILPHS*LALSYQPHFHFVSSHVHTI 53
           L +I   L++  S+   L RN S+   VY+ LYIL    LA  +      V+   +T+
Sbjct: 114 LQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYILATVFLAYVWICEMGVVTLQAYTL 171


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -1

Query: 451 ICKDRTTLFQNSKIIHVCASKLYATR 374
           IC+D   LF+  ++ ++C S+ ++T+
Sbjct: 68  ICEDCYMLFREPQLHNLCRSECFSTK 93


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 109 LALSYQPHFHFVSSHVHTIPNAHFSA 32
           L  SYQ HF+  + + HT P     A
Sbjct: 37  LRTSYQHHFNSPAGNAHTGPTGTHDA 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,052
Number of Sequences: 336
Number of extensions: 4785
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)