Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0609
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0572 + 11667455-11670783,11672026-11672419 141 6e-34
06_02_0263 - 13566621-13569875 128 6e-30
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 80 2e-15
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 75 6e-14
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 74 1e-13
06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467... 72 4e-13
05_04_0174 - 18728199-18731411 72 6e-13
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 43 2e-04
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 41 0.001
11_03_0216 + 11821726-11821860,11823217-11823286,11823704-118238... 40 0.002
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 38 0.006
01_01_0788 + 6111890-6112002,6112121-6112265,6113012-6113086,611... 38 0.011
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 32 0.42
12_02_0442 - 19118536-19119222 31 0.96
06_02_0034 - 10800691-10802215,10802294-10802828,10802902-10803397 30 1.7
06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,402... 29 3.9
06_02_0317 - 14261586-14261783,14262010-14262034,14262381-142625... 28 6.8
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 28 9.0
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 141 bits (341), Expect = 6e-34
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
DVRKQLL IMDR+KLDVVSAG+N +I+K I +GFF +AA+KDPQEGYRTLV++Q VYIH
Sbjct: 1099 DVRKQLLTIMDRYKLDVVSAGRNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIH 1158
Query: 328 PSSALFNRQPEWVIYHELVQTTKE 257
PSSALF RQP+WVIYHELV TTKE
Sbjct: 1159 PSSALFQRQPDWVIYHELVMTTKE 1182
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/76 (57%), Positives = 53/76 (69%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
CSDEILTI++M+ N+FYRP KF QPEGDHLTLLAVY +W+ FS
Sbjct: 1023 CSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP 1082
Query: 555 WCYENFVQIRTLKRAQ 508
WC+ENFVQ R+L+RAQ
Sbjct: 1083 WCFENFVQSRSLRRAQ 1098
Score = 84.2 bits (199), Expect = 1e-16
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = -1
Query: 254 MREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAW 105
MREVT IDPKWL E AP F+K +DPTK+SK K+ +R+EPLY++Y EPN+W
Sbjct: 1184 MREVTVIDPKWLTELAPRFYKSADPTKMSKRKRQERIEPLYDRYHEPNSW 1233
>06_02_0263 - 13566621-13569875
Length = 1084
Score = 128 bits (308), Expect = 6e-30
Identities = 57/84 (67%), Positives = 71/84 (84%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
DVRKQLL IMD++KL+VVSAG + +++K I +GFF +AA+KDPQ GYRT+ D Q VYIH
Sbjct: 943 DVRKQLLEIMDKYKLNVVSAGNDLTKVRKAITAGFFFHAARKDPQGGYRTIADHQQVYIH 1002
Query: 328 PSSALFNRQPEWVIYHELVQTTKE 257
P+SALF +QPEWVIYHE+V TTKE
Sbjct: 1003 PASALFQQQPEWVIYHEVVMTTKE 1026
Score = 99.1 bits (236), Expect = 3e-21
Identities = 42/76 (55%), Positives = 52/76 (68%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
CSDEILTI++M+ N+FYRP F QPEGDHLTLL VY +W+ +FS
Sbjct: 867 CSDEILTIIAMIQTGNIFYRPREKQAQADRKRGNFFQPEGDHLTLLTVYQAWKAKQFSGP 926
Query: 555 WCYENFVQIRTLKRAQ 508
WCYENFVQ+ +L+RAQ
Sbjct: 927 WCYENFVQLTSLRRAQ 942
Score = 83.4 bits (197), Expect = 2e-16
Identities = 32/50 (64%), Positives = 43/50 (86%)
Frame = -1
Query: 254 MREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAW 105
MREVT IDP+WLVE AP F++ +DPTK+SK K+ +R+EPLY++Y EPN+W
Sbjct: 1028 MREVTAIDPRWLVELAPRFYRSADPTKISKRKRQERIEPLYDRYNEPNSW 1077
>07_03_0539 - 19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = -3
Query: 738 QCSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSN 559
+C DE+LTIVSMLSV +VF+RP KF PE DHLTLL VY W++N++
Sbjct: 1059 ECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQYRG 1118
Query: 558 AWCYENFVQIRTLKRAQ 508
WC ++F+ ++ L++A+
Sbjct: 1119 DWCNDHFLHVKGLRKAR 1135
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
+VR QLL I+ K+ + S ++K ICS +F NAA+ Y + ++H
Sbjct: 1136 EVRSQLLDILKTLKIPLTSCHMEWDVVRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLH 1195
Query: 328 PSSALF--NRQPEWVIYHELVQTTKE 257
PSSAL+ P++V+YHELV TTKE
Sbjct: 1196 PSSALYGLGYTPDYVVYHELVLTTKE 1221
Score = 35.1 bits (77), Expect = 0.059
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 254 MREVTTIDPKWLVEFAPAFFKFSD-PTKLSKFKKNQR 147
M+ VT +DP+WL E P FF + T L KK Q+
Sbjct: 1223 MQCVTAVDPQWLAELGPMFFSVKETDTSLLDHKKRQK 1259
>03_02_0789 +
11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 74.9 bits (176), Expect = 6e-14
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
CS+EIL+I +MLSV N F RP +F +GDHLTLL VY++++ N
Sbjct: 509 CSNEILSISAMLSVPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPQ 568
Query: 555 WCYENFVQIRTLKRA 511
WCYENF+ R LK A
Sbjct: 569 WCYENFINARALKSA 583
Score = 66.9 bits (156), Expect = 2e-11
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Frame = -2
Query: 523 VEAGPDVRKQLLGIMDRHKLDVVSAGKNT----VRIQKTICSGFFRNAAKKDPQEGYRTL 356
+++ +VR+QL+ IM R L + S N+ V I+K + +G+F A + Y T+
Sbjct: 580 LKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLAGYFMQVAHLERTGHYLTV 639
Query: 355 VDSQVVYIHPSSALFNRQPEWVIYHELVQTTK 260
D+QVV++HPS+ L + +PEWVIY+E V TT+
Sbjct: 640 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTTR 670
>08_02_0259 - 14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = -3
Query: 738 QCSDEILTIVSMLSVQN-VFYRPXXXXXXXXXXXXKFNQPE-GDHLTLLAVYNSWRNNKF 565
+CSDE+++I SMLSV N +FYRP F+ GDH+ LL VYNSW+ +
Sbjct: 852 KCSDEVISIASMLSVGNSIFYRPKDKQVHADNARLNFHTGNVGDHIALLNVYNSWKETDY 911
Query: 564 SNAWCYENFVQ 532
S WCYEN++Q
Sbjct: 912 STQWCYENYIQ 922
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
D+R QL G+++R ++++ S + I+K I SGFF ++++ YRT+ + Q V
Sbjct: 951 DIRDQLEGLLERVEIEISSNASDLDAIKKAITSGFFHHSSRLQKNGSYRTVKNPQTVL-- 1008
Query: 328 PSSALFNRQPEWVIYHELVQTTKE 257
P WVIYHELV TTKE
Sbjct: 1009 ---------PRWVIYHELVLTTKE 1023
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 254 MREVTTIDPKWLVEFAPAFFKFS--DPTKLSKFKKNQ 150
MR+VT + P WLVE AP +++ D T K K Q
Sbjct: 1025 MRQVTELKPDWLVEIAPHYYQLKDVDDTGTKKLPKGQ 1061
>06_01_0645 +
4670966-4671021,4671128-4671177,4671270-4671350,
4671862-4672078,4673220-4673607,4673830-4674033,
4675174-4675334,4675401-4675586,4675732-4675963,
4676530-4676732,4677074-4677208,4677367-4677550
Length = 698
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
DV Q+ G + + L+V S G + V ++ + + FF NAA + P YR L SQ V IH
Sbjct: 590 DVHSQIQGHVQQMGLNVSSCGDDMVLFRRCLTAAFFLNAAMRQPDGSYRALATSQSVQIH 649
Query: 328 PSSALFNRQPEWVIYHELVQTTK 260
PSS LF ++P+ I++ELV+T++
Sbjct: 650 PSSVLFQKKPDCAIFNELVRTSQ 672
Score = 54.8 bits (126), Expect = 7e-08
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Frame = -3
Query: 738 QCSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRN----- 574
+C +E+L +VSMLSV+++F+ P F EGDH+TL+ VY + +
Sbjct: 498 KCLEEMLIVVSMLSVESIFFSPREKLEEARAARKSFESSEGDHITLVNVYRAAKECLEKS 557
Query: 573 ----------NKFSNAWCYENFVQIRTLKRA 511
K N WC ENF+ R+L+ A
Sbjct: 558 KNANAKEKTMEKALNRWCRENFINYRSLRHA 588
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 263 ERVMREVTTIDPKWLVEFAPAFFKFSD 183
+ ++++T IDP WL E AP ++ D
Sbjct: 672 QNYVKDLTRIDPVWLAELAPQYYATED 698
>05_04_0174 - 18728199-18731411
Length = 1070
Score = 71.7 bits (168), Expect = 6e-13
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQN-VFYRPXXXXXXXXXXXXKFNQPE-GDHLTLLAVYNSWRNNKFS 562
CS+E++TI +MLS N VFYRP F+ GDH+ LL VYN+W + +S
Sbjct: 844 CSEEVITIAAMLSAGNAVFYRPRDKRVHADAARRAFHAGNAGDHVALLNVYNAWAESGYS 903
Query: 561 NAWCYENFVQIRTLKRAQ 508
WC E+FVQ RT++RA+
Sbjct: 904 PQWCRESFVQHRTMRRAR 921
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSA--GKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVY 335
DVR QL +++R ++ S+ G + ++K + +G+FR+AA+ YR + Q V+
Sbjct: 922 DVRDQLGALLERVEIAPCSSAGGGDLDAVRKAVTAGYFRHAARLQRDGSYRAVKSRQTVF 981
Query: 334 IHPSSALFNRQPEWVIYHELVQTTKE 257
+HPSS + P W +YHELV TTKE
Sbjct: 982 VHPSSGVAQAPPRWALYHELVLTTKE 1007
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 254 MREVTTIDPKWLVEFAPAFFKFSD 183
MR+VT + P+WLVE AP +++ D
Sbjct: 1009 MRQVTELKPEWLVEIAPHYYERKD 1032
>07_03_1304 -
25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -3
Query: 633 FNQPEGDHLTLLAVYNSWRN-NKFSNAWCYENFVQIRTLKRAQ 508
F +GD TLLAVY W + ++ N WC++N + +T++R Q
Sbjct: 746 FCHQDGDLFTLLAVYKEWEDEHENRNTWCWQNSINAKTMRRCQ 788
Score = 34.7 bits (76), Expect = 0.078
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -2
Query: 370 GYRTLVDSQVVYIHPSSAL--FNRQPEWVIYHELVQTTKE 257
GY+ + Q V +HPS +L ++ +PEWV++ E++ +
Sbjct: 846 GYQVISTDQAVKLHPSCSLLIYDSKPEWVVFTEILSVPNQ 885
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = -3
Query: 738 QCSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPE-GDHLTLLAVYNSWRNNKFS 562
+C D ILT+V+ LS ++ F P +F+ + DH+ L+ Y W++ +
Sbjct: 761 RCIDPILTVVAGLSARDPFLLPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAERE 820
Query: 561 NA---WCYENFVQIRTLK 517
+ +C+ NF+ +TL+
Sbjct: 821 GSAYEYCWRNFLSAQTLQ 838
>11_03_0216 +
11821726-11821860,11823217-11823286,11823704-11823861,
11824304-11824479,11824564-11824612,11825293-11825430
Length = 241
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Frame = -2
Query: 433 RIQKTICSGFFRNAAKKD-PQEGYRTL-VDSQVVYIHPSSAL----FNRQPEWVIYHELV 272
++++ +C G+ A++ GY T+ +Q+V +HP S L + + P +V+YHEL+
Sbjct: 87 KLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEGDEYGKLPVYVVYHELI 146
Query: 271 QTTK 260
TT+
Sbjct: 147 NTTR 150
Score = 37.1 bits (82), Expect = 0.015
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 618 GDHLTLLAVYNSWRNNKFSNAWCYENFVQIRTLK 517
GDH+ LL ++ SW + WC ++ +Q+R +K
Sbjct: 17 GDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMK 50
>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = -3
Query: 738 QCSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKF-NQPEGDHLTLLAVYNSWRNNKFS 562
QC D LTI + L+ +N F P F DH+ L+ + +W+ + S
Sbjct: 1663 QCLDPALTIAAALAYRNPFVLPIDRKEEADAVKRSFAGDSCSDHIALVKAFEAWKEARRS 1722
Query: 561 ---NAWCYENFVQIRTLK 517
++C+ENF+ TL+
Sbjct: 1723 GRERSFCWENFLSPMTLQ 1740
>01_01_0788 +
6111890-6112002,6112121-6112265,6113012-6113086,
6114171-6114250,6115500-6115569,6115664-6115759,
6116633-6116756,6116921-6116967,6117044-6117127,
6117199-6117252,6117451-6117551,6118744-6118834,
6119989-6120153,6121341-6121412,6122025-6122111,
6122899-6122952,6122992-6123062,6123882-6124029
Length = 558
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/83 (27%), Positives = 37/83 (44%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
D+R+QL+ I+ R + + S ++ ++K I +G F A + + T I
Sbjct: 444 DIREQLVRIIKRFGIPLTSCDRDMEAVRKAIIAGAFAYACHLEGRFYSHTSPTYSQNVIS 503
Query: 328 PSSALFNRQPEWVIYHELVQTTK 260
P+WVIY LV T K
Sbjct: 504 LKKPNIRVNPKWVIYQSLVSTDK 526
Score = 35.5 bits (78), Expect = 0.045
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 275 STDYERVMREVTTIDPKWLVEFAPAFFKFSDP 180
STD + MR V I+P WL E AP F++F P
Sbjct: 523 STD-KHYMRNVIAIEPSWLTEAAPHFYQFRTP 553
>02_05_0672 + 30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -2
Query: 367 YRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTK 260
Y++ + +Y+H SS++ PE+V+Y EL+ T +
Sbjct: 1013 YQSCAFNDTIYLHRSSSVARIAPEFVVYSELLHTKR 1048
>12_02_0442 - 19118536-19119222
Length = 228
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 700 ERPKRFLSAEGQAGACRPEEGQVQPAG 620
E+P R G+AG PE G + PAG
Sbjct: 168 EKPSRAAEGRGEAGELAPERGGISPAG 194
>06_02_0034 - 10800691-10802215,10802294-10802828,10802902-10803397
Length = 851
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 566 NLLFLQLLYTA-SSVRWSPSGWLNLAFFWSASACLSFGR*KTF 691
+LL L L Y A SS+RW PSG++ +AF A C + + +F
Sbjct: 786 DLLGLLLAYVAGSSMRWEPSGYV-IAFVIGALGCAAIHKFLSF 827
>06_01_0569 +
4019254-4021996,4022121-4022272,4022356-4022427,
4022521-4022673,4022749-4022912,4022990-4023137,
4023530-4023652,4023774-4023861,4023951-4024129
Length = 1273
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 192 FKEGGSKLNQPFRVYGRDFPH 254
FK +++ PFR YG D PH
Sbjct: 630 FKNSNNQVPDPFREYGHDLPH 650
>06_02_0317 -
14261586-14261783,14262010-14262034,14262381-14262506,
14263124-14263204,14265424-14265626,14266278-14266418
Length = 257
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 218 VEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAW 105
+EF +F +F PT +S+ + + +E Y K+ W
Sbjct: 107 MEFVDSFHRFVHPTAMSEQRIREYIEGKYGKFGVDRVW 144
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 436 VRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVV 338
+ +Q+T+CS F A + + +L+DSQ+V
Sbjct: 305 MEVQRTLCSTFMDFADNTEDENELESLIDSQLV 337
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,598,008
Number of Sequences: 37544
Number of extensions: 373350
Number of successful extensions: 1021
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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