Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0609
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 147 8e-36
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 147 8e-36
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 83 2e-16
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 83 2e-16
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 83 3e-16
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 74 1e-13
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 61 7e-10
AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical ... 57 2e-08
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z69384-12|CAM33510.1| 319|Caenorhabditis elegans Hypothetical p... 30 1.5
Z69384-11|CAC42340.2| 384|Caenorhabditis elegans Hypothetical p... 30 1.5
Z69383-16|CAM33511.1| 319|Caenorhabditis elegans Hypothetical p... 30 1.5
Z69383-15|CAC42286.2| 384|Caenorhabditis elegans Hypothetical p... 30 1.5
Z73425-6|CAB61014.1| 382|Caenorhabditis elegans Hypothetical pr... 28 6.0
U94834-1|AAC47509.1| 378|Caenorhabditis elegans multiple exosto... 28 6.0
AB241458-1|BAF48989.1| 382|Caenorhabditis elegans heparan sulfa... 28 6.0
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 147 bits (356), Expect = 8e-36
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = -2
Query: 529 QDVEAGPDVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVD 350
+ ++ D+RKQLLGIMDRHKL +VS G++ R+QK ICSGFFRNAAK+DPQEGYRTL D
Sbjct: 1045 RSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTD 1104
Query: 349 SQVVYIHPSSALFNRQPEWVIYHELVQTTKE 257
Q VYIHPSSA F +QPEWV+YHELV TTKE
Sbjct: 1105 GQNVYIHPSSACFQQQPEWVVYHELVMTTKE 1135
Score = 113 bits (273), Expect = 9e-26
Identities = 48/76 (63%), Positives = 61/76 (80%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
CS+E+LTIV+ML+VQN+FYRP KF+QPEGDHLTLLAVYNSW+N+ FS
Sbjct: 976 CSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQP 1035
Query: 555 WCYENFVQIRTLKRAQ 508
WC+ENF+Q+R++KRAQ
Sbjct: 1036 WCFENFIQVRSMKRAQ 1051
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/83 (51%), Positives = 55/83 (66%)
Frame = -1
Query: 353 GQSSCLYTSFQCTVQQTTGMGNLP*ASTDYERVMREVTTIDPKWLVEFAPAFFKFSDPTK 174
GQ+ ++ S C QQ + T E MREVT IDPKWLVEFAP+FFK D TK
Sbjct: 1105 GQNVYIHPSSACFQQQPEWVVYHELVMTTKE-YMREVTAIDPKWLVEFAPSFFKIGDSTK 1163
Query: 173 LSKFKKNQRLEPLYNKYEEPNAW 105
LS FK+NQ+++PL++KY + NAW
Sbjct: 1164 LSTFKRNQKIDPLFDKYADANAW 1186
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 147 bits (356), Expect = 8e-36
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = -2
Query: 529 QDVEAGPDVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVD 350
+ ++ D+RKQLLGIMDRHKL +VS G++ R+QK ICSGFFRNAAK+DPQEGYRTL D
Sbjct: 1045 RSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTD 1104
Query: 349 SQVVYIHPSSALFNRQPEWVIYHELVQTTKE 257
Q VYIHPSSA F +QPEWV+YHELV TTKE
Sbjct: 1105 GQNVYIHPSSACFQQQPEWVVYHELVMTTKE 1135
Score = 113 bits (273), Expect = 9e-26
Identities = 48/76 (63%), Positives = 61/76 (80%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
CS+E+LTIV+ML+VQN+FYRP KF+QPEGDHLTLLAVYNSW+N+ FS
Sbjct: 976 CSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQP 1035
Query: 555 WCYENFVQIRTLKRAQ 508
WC+ENF+Q+R++KRAQ
Sbjct: 1036 WCFENFIQVRSMKRAQ 1051
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/83 (51%), Positives = 55/83 (66%)
Frame = -1
Query: 353 GQSSCLYTSFQCTVQQTTGMGNLP*ASTDYERVMREVTTIDPKWLVEFAPAFFKFSDPTK 174
GQ+ ++ S C QQ + T E MREVT IDPKWLVEFAP+FFK D TK
Sbjct: 1105 GQNVYIHPSSACFQQQPEWVVYHELVMTTKE-YMREVTAIDPKWLVEFAPSFFKIGDSTK 1163
Query: 173 LSKFKKNQRLEPLYNKYEEPNAW 105
LS FK+NQ+++PL++KY + NAW
Sbjct: 1164 LSTFKRNQKIDPLFDKYADANAW 1186
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical protein
C04H5.6 protein.
Length = 1008
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = -3
Query: 738 QCSDEILTIVSMLSVQN-VFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFS 562
+CS+EI+TI +MLS VFYRP F P GDH+TL+ VYN W+ + FS
Sbjct: 801 ECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFS 860
Query: 561 NAWCYENFVQIRTLKRAQ 508
WC EN+VQ RT+KRA+
Sbjct: 861 QRWCVENYVQHRTMKRAR 878
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
DVR QL+G+++R +++ S+ +T++I+K I +G+F N +K D Y+T+ + H
Sbjct: 879 DVRDQLVGLLERVEIETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPH 937
Query: 328 PSSALFNRQPEWVIYHELVQTTKE**GKSRP*TRNGW-LSLLPPSLNSRTQQNSLNLRRT 152
P+S LF P WV+Y ELV T+KE + +GW L + P R +++ N +
Sbjct: 938 PNSCLFEETPRWVVYFELVFTSKE-FMREMSEIESGWLLEVAPHYYKGRELEDATNKKMP 996
Query: 151 RD 146
++
Sbjct: 997 KN 998
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = -3
Query: 738 QCSDEILTIVSMLSVQN-VFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFS 562
+CS+EI+TI +MLS VFYRP F P GDH+TL+ VYN W+ + FS
Sbjct: 801 ECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFS 860
Query: 561 NAWCYENFVQIRTLKRAQ 508
WC EN+VQ RT+KRA+
Sbjct: 861 QRWCVENYVQHRTMKRAR 878
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
DVR QL+G+++R +++ S+ +T++I+K I +G+F N +K D Y+T+ + H
Sbjct: 879 DVRDQLVGLLERVEIETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPH 937
Query: 328 PSSALFNRQPEWVIYHELVQTTKE**GKSRP*TRNGW-LSLLPPSLNSRTQQNSLNLRRT 152
P+S LF P WV+Y ELV T+KE + +GW L + P R +++ N +
Sbjct: 938 PNSCLFEETPRWVVYFELVFTSKE-FMREMSEIESGWLLEVAPHYYKGRELEDATNKKMP 996
Query: 151 RD 146
++
Sbjct: 997 KN 998
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = -3
Query: 738 QCSDEILTIVSMLSVQN-VFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFS 562
+CS+EI+TI +MLS VFYRP F P GDH+TL+ VYN W+ + FS
Sbjct: 801 ECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFS 860
Query: 561 NAWCYENFVQIRTLKRAQ 508
WC EN+VQ RT+KRA+
Sbjct: 861 QRWCVENYVQHRTMKRAR 878
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
DVR QL+G+++R +++ S+ +T++I+K I +G+F N +K D Y+T+ + H
Sbjct: 879 DVRDQLVGLLERVEIETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPH 937
Query: 328 PSSALFNRQPEWVIYHELVQTTKE**GKSRP*TRNGW-LSLLPPSLNSRTQQNSLNLRRT 152
P+S LF P WV+Y ELV T+KE + +GW L + P R +++ N +
Sbjct: 938 PNSCLFEETPRWVVYFELVFTSKE-FMREMSEIESGWLLEVAPHYYKGRELEDATNKKMP 996
Query: 151 RD 146
++
Sbjct: 997 KN 998
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
CSDE+LTIVSMLSV +F+RP KF PE DHLT L VY WR +K+S
Sbjct: 877 CSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAK 936
Query: 555 WCYENFVQIRTLKRAQ 508
WC +N++ ++ LK+ +
Sbjct: 937 WCADNYLHVKALKKVR 952
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
+VR QL IM KL ++S G ++K ICS +F NAA+ Y + ++H
Sbjct: 953 EVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLH 1012
Query: 328 PSSALFNR--QPEWVIYHELVQTTKE 257
P+SALF P++V+YHEL+ T KE
Sbjct: 1013 PTSALFGMGFMPDYVVYHELIMTAKE 1038
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
CSDE+LTIVSMLSV +F+RP KF PE DHLT L VY WR +K+S
Sbjct: 877 CSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAK 936
Query: 555 WCYENFVQIRTLKRAQ 508
WC +N++ ++ LK+ +
Sbjct: 937 WCADNYLHVKALKKVR 952
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = -2
Query: 508 DVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 329
+VR QL IM KL ++S G ++K ICS +F NAA+ Y + ++H
Sbjct: 953 EVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLH 1012
Query: 328 PSSALFNR--QPEWVIYHELVQTTKE 257
P+SALF P++V+YHEL+ T KE
Sbjct: 1013 PTSALFGMGFMPDYVVYHELIMTAKE 1038
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
CS+EIL+I +MLSV + RP +F +GDHLTLL VY+S++ N+
Sbjct: 527 CSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQ 586
Query: 555 WCYENFVQIRTLKRAQT 505
WCY+NF+ RT+K A T
Sbjct: 587 WCYDNFINYRTMKTADT 603
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = -2
Query: 505 VRKQLLGIMDRHKLDVVSAGKNT----VRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVV 338
VR QL +MD++ L VS + + I+K + +GFF A + Y T+ D+Q+V
Sbjct: 604 VRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLV 663
Query: 337 YIHPSSALFNRQPEWVIYHELVQTTK 260
+HPS+ L + +PEW +Y+E V TTK
Sbjct: 664 NLHPSTVL-DHKPEWALYNEFVLTTK 688
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
CS+EIL+I +MLSV + RP +F +GDHLTLL VY+S++ N+
Sbjct: 527 CSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQ 586
Query: 555 WCYENFVQIRTLKRAQT 505
WCY+NF+ RT+K A T
Sbjct: 587 WCYDNFINYRTMKTADT 603
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = -2
Query: 505 VRKQLLGIMDRHKLDVVSAGKNT----VRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVV 338
VR QL +MD++ L VS + + I+K + +GFF A + Y T+ D+Q+V
Sbjct: 604 VRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLV 663
Query: 337 YIHPSSALFNRQPEWVIYHELVQTTK 260
+HPS+ L + +PEW +Y+E V TTK
Sbjct: 664 NLHPSTVL-DHKPEWALYNEFVLTTK 688
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
CS E++TIV+M+ +Q+VF P KF EGDH+T+L V+ + N S
Sbjct: 523 CSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKK 582
Query: 555 WCYENFVQIRTLKRA 511
WC ++FV R L RA
Sbjct: 583 WCSDHFVNYRGLMRA 597
Score = 34.3 bits (75), Expect = 0.092
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = -1
Query: 254 MREVTTIDPKWLVEFAPAFFKFSDPTKLSK 165
+R+VT I+P+WL E AP +++F +L++
Sbjct: 686 IRDVTVIEPEWLYELAPHYYEFGTEGELAE 715
>AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical
protein Y108F1.5 protein.
Length = 330
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = -3
Query: 735 CSDEILTIVSMLSVQNVFYRPXXXXXXXXXXXXKFNQPEGDHLTLLAVYNSWRNNKFSNA 556
C E++TIV+M+ +Q+VF P KF EG+H+T+L V+ + N S
Sbjct: 49 CFTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGNHITMLNVFTKFVENGRSKK 108
Query: 555 WCYENFVQIRTLKRA 511
WC ++FV R L RA
Sbjct: 109 WCSDHFVNYRGLMRA 123
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical protein
C06E1.10 protein.
Length = 1148
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -2
Query: 400 RNAAKKDPQEG-YRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKE**GKSRP*TRN 224
R+ +++ Q+G Y T + V+I P S +F +PE+VIY ELVQ ++ S
Sbjct: 921 RSVGQEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDK 980
Query: 223 GWLSLLPPSLNSRTQQN 173
WLS L S + +Q+
Sbjct: 981 EWLSRLAESYCNYGEQD 997
>Z69384-12|CAM33510.1| 319|Caenorhabditis elegans Hypothetical
protein F13E9.11b protein.
Length = 319
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 563 ENLLFLQLLYTASSVRWSPSGWLNLAFFWSASACLSF 673
+N+ FL LL+ AS +W+ WL L AC++F
Sbjct: 174 DNIYFLDLLWQASKDKWNLELWLELTIL--IVACINF 208
>Z69384-11|CAC42340.2| 384|Caenorhabditis elegans Hypothetical
protein F13E9.11a protein.
Length = 384
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 563 ENLLFLQLLYTASSVRWSPSGWLNLAFFWSASACLSF 673
+N+ FL LL+ AS +W+ WL L AC++F
Sbjct: 239 DNIYFLDLLWQASKDKWNLELWLELTIL--IVACINF 273
>Z69383-16|CAM33511.1| 319|Caenorhabditis elegans Hypothetical
protein F13E9.11b protein.
Length = 319
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 563 ENLLFLQLLYTASSVRWSPSGWLNLAFFWSASACLSF 673
+N+ FL LL+ AS +W+ WL L AC++F
Sbjct: 174 DNIYFLDLLWQASKDKWNLELWLELTIL--IVACINF 208
>Z69383-15|CAC42286.2| 384|Caenorhabditis elegans Hypothetical
protein F13E9.11a protein.
Length = 384
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 563 ENLLFLQLLYTASSVRWSPSGWLNLAFFWSASACLSF 673
+N+ FL LL+ AS +W+ WL L AC++F
Sbjct: 239 DNIYFLDLLWQASKDKWNLELWLELTIL--IVACINF 273
>Z73425-6|CAB61014.1| 382|Caenorhabditis elegans Hypothetical
protein F12F6.3 protein.
Length = 382
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 349 SQVVYIHPSSALFNRQPEWVIYHELVQ 269
S+ VYIHP F P+ VIY ++++
Sbjct: 44 SKKVYIHPMEKRFEESPQSVIYSKILK 70
>U94834-1|AAC47509.1| 378|Caenorhabditis elegans multiple exostoses
homolog 1 protein.
Length = 378
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 349 SQVVYIHPSSALFNRQPEWVIYHELVQ 269
S+ VYIHP F P+ VIY ++++
Sbjct: 40 SKKVYIHPMEKRFEESPQSVIYSKILK 66
>AB241458-1|BAF48989.1| 382|Caenorhabditis elegans heparan sulfate
polymerase protein.
Length = 382
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 349 SQVVYIHPSSALFNRQPEWVIYHELVQ 269
S+ VYIHP F P+ VIY ++++
Sbjct: 44 SKKVYIHPMEKRFEESPQSVIYSKILK 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,758,133
Number of Sequences: 27780
Number of extensions: 316106
Number of successful extensions: 909
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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