Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0608
(779 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001108-1|AAH01108.1| 290|Homo sapiens PIH1 domain containing ... 79 2e-14
AK000650-1|BAA91307.1| 290|Homo sapiens protein ( Homo sapiens ... 79 2e-14
BC019238-1|AAH19238.1| 315|Homo sapiens PIH1 domain containing ... 37 0.094
BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein. 35 0.38
BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein. 35 0.38
AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6... 35 0.38
AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6 p... 35 0.38
AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6 p... 35 0.38
X54559-1|CAB56793.1| 1390|Homo sapiens proto-oncogene protein. 31 3.5
J02958-1|AAA59591.1| 1408|Homo sapiens MET protein. 31 3.5
BC130420-1|AAI30421.1| 1390|Homo sapiens met proto-oncogene (hep... 31 3.5
AC002080-1|AAB54047.1| 754|Homo sapiens receptor protein tyrosi... 31 3.5
>BC001108-1|AAH01108.1| 290|Homo sapiens PIH1 domain containing 1
protein.
Length = 290
Score = 79.0 bits (186), Expect = 2e-14
Identities = 35/95 (36%), Positives = 57/95 (60%)
Frame = +3
Query: 27 KVFVNICQTDAIPCP*DITNDELMYILSSGDPSSYRVPMSIGEGRTEHDKSGAPATAYDV 206
KVF+NIC + +IP P D+T +EL+ +L D + +R+PMS+GE E D G TAYDV
Sbjct: 64 KVFINICHSPSIPPPADVTEEELLQMLEE-DQAGFRIPMSLGEPHAELDAKGQGCTAYDV 122
Query: 207 AVNPEFFKKIEKDELFKHFFSPLCLKDYRININLK 311
AVN +F+++++ + + + + NL+
Sbjct: 123 AVNSDFYRRMQNSDFLRELVITIAREGLEDKYNLQ 157
Score = 37.1 bits (82), Expect = 0.071
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 529 EYLLAEFKIPASVEVKDLNLEVGEDRLVLDSKGVYEPVDFFLPCSVDQDIIDAQLDRNID 708
+ LLAE +P L+LE+GE+RLV+ +D ++P ++ A R
Sbjct: 218 DLLLAEIDLPKLDGALGLSLEIGENRLVMGGPQQLYHLDAYIPLQINSHESKAAFHRKRK 277
Query: 709 ILSVKMPVI 735
L V MP++
Sbjct: 278 QLMVAMPLL 286
>AK000650-1|BAA91307.1| 290|Homo sapiens protein ( Homo sapiens
cDNA FLJ20643 fis, clone KAT02633. ).
Length = 290
Score = 79.0 bits (186), Expect = 2e-14
Identities = 35/95 (36%), Positives = 57/95 (60%)
Frame = +3
Query: 27 KVFVNICQTDAIPCP*DITNDELMYILSSGDPSSYRVPMSIGEGRTEHDKSGAPATAYDV 206
KVF+NIC + +IP P D+T +EL+ +L D + +R+PMS+GE E D G TAYDV
Sbjct: 64 KVFINICHSPSIPPPADVTEEELLQMLEE-DQAGFRIPMSLGEPHAELDAKGQGCTAYDV 122
Query: 207 AVNPEFFKKIEKDELFKHFFSPLCLKDYRININLK 311
AVN +F+++++ + + + + NL+
Sbjct: 123 AVNSDFYRRMQNSDFLRELVITIAREGLEDKYNLQ 157
Score = 36.7 bits (81), Expect = 0.094
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 529 EYLLAEFKIPASVEVKDLNLEVGEDRLVLDSKGVYEPVDFFLPCSVDQDIIDAQLDRNID 708
+ LLAE +P L+LE+GE+RLV+ +D ++P ++ A R
Sbjct: 218 DLLLAEVDLPKLDGALGLSLEIGENRLVMGGPQQLYHLDAYIPLQINSHESKAAFHRKRK 277
Query: 709 ILSVKMPVI 735
L V MP++
Sbjct: 278 QLMVAMPLL 286
>BC019238-1|AAH19238.1| 315|Homo sapiens PIH1 domain containing 2
protein.
Length = 315
Score = 36.7 bits (81), Expect = 0.094
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +3
Query: 6 TRI--PDNKKVFVNICQTDAIPCP*DITNDELMYILSSGDPSSYRVPMSIGEGRTEHDKS 179
TRI P K +F+N+CQ IP P +++ VP+++G+ + S
Sbjct: 56 TRILKPKEKILFINLCQWTRIPAP---------------QSTTHPVPLTVGKPEDTTEIS 100
Query: 180 GAPATAYDVAVNPEFFKKIEKDELFKHFFSPLCLK 284
A T DVA NP+ EKD++ K+ + +K
Sbjct: 101 DA-YTVIDVAYNPDVLHAAEKDQVKKNQLIQMAMK 134
>BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein.
Length = 1500
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 363 CNHIGFRFEIYNKQKVKSNLHLLRKLKAKHCQEVKQLIERMKLCLDLE 506
C +F+I VK NL L K+K H +EV+Q ++R+ L LD++
Sbjct: 561 CPQFNVQFDILT---VKENLSLFAKIKGIHLKEVEQEVQRILLELDMQ 605
>BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein.
Length = 1500
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 363 CNHIGFRFEIYNKQKVKSNLHLLRKLKAKHCQEVKQLIERMKLCLDLE 506
C +F+I VK NL L K+K H +EV+Q ++R+ L LD++
Sbjct: 561 CPQFNVQFDILT---VKENLSLFAKIKGIHLKEVEQEVQRILLELDMQ 605
>AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6
protein.
Length = 1617
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 363 CNHIGFRFEIYNKQKVKSNLHLLRKLKAKHCQEVKQLIERMKLCLDLE 506
C +F+I VK NL L K+K H +EV+Q ++R+ L LD++
Sbjct: 561 CPQFNVQFDILT---VKENLSLFAKIKGIHLKEVEQEVQRILLELDMQ 605
>AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 363 CNHIGFRFEIYNKQKVKSNLHLLRKLKAKHCQEVKQLIERMKLCLDLE 506
C +F+I VK NL L K+K H +EV+Q ++R+ L LD++
Sbjct: 561 CPQFNVQFDILT---VKENLSLFAKIKGIHLKEVEQEVQRILLELDMQ 605
>AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 363 CNHIGFRFEIYNKQKVKSNLHLLRKLKAKHCQEVKQLIERMKLCLDLE 506
C +F+I VK NL L K+K H +EV+Q ++R+ L LD++
Sbjct: 561 CPQFNVQFDILT---VKENLSLFAKIKGIHLKEVEQEVQRILLELDMQ 605
>X54559-1|CAB56793.1| 1390|Homo sapiens proto-oncogene protein.
Length = 1390
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 172 SCSVRPSPILMGTL*LEGSPELNMYINSSFVMSQGHG 62
SC++ S M TL P +N + N S ++S GHG
Sbjct: 609 SCTLTLSESTMNTLKCTVGPAMNKHFNMSIIISNGHG 645
>J02958-1|AAA59591.1| 1408|Homo sapiens MET protein.
Length = 1408
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 172 SCSVRPSPILMGTL*LEGSPELNMYINSSFVMSQGHG 62
SC++ S M TL P +N + N S ++S GHG
Sbjct: 609 SCTLTLSESTMNTLKCTVGPAMNKHFNMSIIISNGHG 645
>BC130420-1|AAI30421.1| 1390|Homo sapiens met proto-oncogene
(hepatocyte growth factor receptor) protein.
Length = 1390
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 172 SCSVRPSPILMGTL*LEGSPELNMYINSSFVMSQGHG 62
SC++ S M TL P +N + N S ++S GHG
Sbjct: 609 SCTLTLSESTMNTLKCTVGPAMNKHFNMSIIISNGHG 645
>AC002080-1|AAB54047.1| 754|Homo sapiens receptor protein tyrosine
kinase protein.
Length = 754
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 172 SCSVRPSPILMGTL*LEGSPELNMYINSSFVMSQGHG 62
SC++ S M TL P +N + N S ++S GHG
Sbjct: 609 SCTLTLSESTMNTLKCTVGPAMNKHFNMSIIISNGHG 645
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,574,817
Number of Sequences: 237096
Number of extensions: 2165043
Number of successful extensions: 3888
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3886
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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