Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0608
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74031-4|CAA98456.4|  291|Caenorhabditis elegans Hypothetical pr...    57   2e-08
U23448-4|AAS80348.1|  330|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF000262-6|AAN60524.1|  318|Caenorhabditis elegans Lipid deplete...    28   8.6  

>Z74031-4|CAA98456.4|  291|Caenorhabditis elegans Hypothetical
           protein F32D8.4 protein.
          Length = 291

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = +3

Query: 24  KKVFVNICQTDAIPCP*D-ITNDELMYILSSGDPSSYRVPMSIGEGRTEHDKSGAPATAY 200
           +K FVN+C  + +P P D    DE+   L +G+PS +R+PMS+GE     D S   +   
Sbjct: 40  RKCFVNVCHCEQLPPPIDDFDQDEIAAQLDAGNPS-FRIPMSVGEIDCVKDHSDENSIKI 98

Query: 201 DVAVNPEFFKK---IEKDELFKHFFSPLCL 281
           DV VN  F+KK      D  F+H    LCL
Sbjct: 99  DVLVNSTFYKKRLASPNDAFFRHL---LCL 125



 Score = 32.3 bits (70), Expect = 0.40
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
 Frame = +2

Query: 287 LQDKYQFEIDMQKFTILKNRKSIGTLQSHRI------QIRDIQQTESKIKPPLIEEIKGK 448
           ++D++  ++D  K  +L+NR S+G L+  +I      QI +    E K++   +E+ + K
Sbjct: 131 VKDRHSIDLDPLKPIVLRNRVSVGELEVQKIHKKPEKQIVEEMYQEDKVR---MEKEEKK 187

Query: 449 ALSRSEAAHRKNEI 490
            +   + A  KNE+
Sbjct: 188 QVGNDDVAEMKNEM 201


>U23448-4|AAS80348.1|  330|Caenorhabditis elegans Hypothetical
           protein C04A2.1 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 381 RFEIYNKQKV--KSNLHLLRKLKAKHCQEVKQLIERMKLCLDL 503
           R E Y K  +  + ++H+L  L  +HC  V   +E++ + LD+
Sbjct: 184 RQEYYGKNMIGLRRDMHVLHSLLREHCPRVVVTLEKLDVGLDM 226


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
            T01D3.7 protein.
          Length = 2882

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 434  EIKGKALSRSEAAHRKNEIVFRLRR 508
            ++KGK +  + A+ RKN +V R+RR
Sbjct: 1197 KLKGKLIGPAAASSRKNPVVIRVRR 1221


>AF000262-6|AAN60524.1|  318|Caenorhabditis elegans Lipid depleted
           protein 2 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = +2

Query: 317 MQKFTILKNRKSIGTLQSHRIQIRDIQQTESKIKPPLIEEIKGKALSRSEAAHRKNEIVF 496
           M K   +    S+     HR+ I  ++  E K+KP  IE++ G++ + S A++  ++   
Sbjct: 68  MMKGESITVEPSVKRALKHRVFIEKMKPVEDKMKPQ-IEKLLGRSSAESGASNGSSKGNH 126

Query: 497 RLR 505
           R+R
Sbjct: 127 RVR 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,456,799
Number of Sequences: 27780
Number of extensions: 374669
Number of successful extensions: 931
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)