Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0608
(779 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 0.79
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 24 1.4
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 3.2
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 4.2
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 5.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 5.6
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 9.7
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 9.7
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 9.7
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 9.7
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.0 bits (52), Expect = 0.79
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 381 RFEIYNKQKVKSNLHLLRKLKAKHCQEVKQLIERMKLCLDLEEATNRGN 527
R + Y K K K L +K H E K ++ER K E+ +R N
Sbjct: 49 REQEYEKLKRKMILEYELYIKYSHTHEKKLVLERSKTKSKSPESRDRSN 97
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 442 FNFLNKWRFDFTFCLLYIS-NLNPM 371
++ +N+W + T CL Y S +NP+
Sbjct: 290 YDDINQWVYPLTGCLYYFSTTINPI 314
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 510 LLLSLNTISFFL*AASLLDNALP 442
++L NTI F+ AS ++N+LP
Sbjct: 264 IVLGTNTILTFMTLASKVENSLP 286
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -2
Query: 433 LNKWRFDFTFCLLYIS-NLNPM 371
LN+W + + CL Y S +NP+
Sbjct: 305 LNEWLYILSGCLYYFSTTINPI 326
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 21 NKKVFVNICQTDAIPCP 71
NKK++ NI + IP P
Sbjct: 109 NKKLYYNIINIEQIPVP 125
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 21 NKKVFVNICQTDAIPCP 71
NKK++ NI + IP P
Sbjct: 109 NKKLYYNIINIEQIPVP 125
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 21 NKKVFVNICQTDAIPCP 71
NKK++ NI + IP P
Sbjct: 329 NKKLYYNIINIEQIPVP 345
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 21 NKKVFVNICQTDAIPCP 71
NKK++ NI + IP P
Sbjct: 333 NKKLYYNIINIEQIPVP 349
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 18 DNKKVFVNICQTDAIPCP 71
+NKK++ NI + IP P
Sbjct: 322 NNKKLYYNINYIEQIPVP 339
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 203 CGCQSRVLQEN 235
CGC S +L EN
Sbjct: 305 CGCNSTMLNEN 315
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 203 CGCQSRVLQEN 235
CGC S +L EN
Sbjct: 305 CGCNSTMLNEN 315
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 387 EIYNKQKVKSNLHLLRKLKAKHCQEV 464
+I+ ++ + + L L K A HCQEV
Sbjct: 27 KIWTEEFLSTILRLDPKFIALHCQEV 52
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,420
Number of Sequences: 438
Number of extensions: 4417
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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