Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0607
(729 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 23 1.9
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 1.9
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 23 1.9
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 1.9
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 23 3.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.4
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 22 4.4
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 22 5.8
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 7.7
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -3
Query: 112 FVPRFVDDLSHRDRHQQQPDYRTHLALSMRTKSAQKR 2
F +D+L Q PD T L+ RTK + R
Sbjct: 227 FTAHQLDELEKAFERTQYPDIYTREELAQRTKLTEAR 263
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SCRAPRQVHHYEYTSLQMKGWVRRHL 327
SC + +H Y+ +LQ G +R+H+
Sbjct: 155 SCMEYQHLHRYKEEALQGDGRMRQHV 180
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SCRAPRQVHHYEYTSLQMKGWVRRHL 327
SC + +H Y+ +LQ G +R+H+
Sbjct: 155 SCMEYQHLHRYKEEALQGDGRMRQHV 180
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SCRAPRQVHHYEYTSLQMKGWVRRHL 327
SC + +H Y+ +LQ G +R+H+
Sbjct: 155 SCMEYQHLHRYKEEALQGDGRMRQHV 180
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 439 FRSKQPR*TYLHQNQYNSFLLLLTDYSCECRRSSTNTFRTF 561
+++ PR T +NQ N + +++ + + SS NTF TF
Sbjct: 413 YKATLPRYT---ENQLNYPGITVSNIEVQSQGSSKNTFNTF 450
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 397 DIWTIPLTTFLVPM 438
D+W IP+ FLV +
Sbjct: 252 DLWIIPIAIFLVSL 265
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 397 DIWTIPLTTFLVPM 438
D+W IP+ FLV +
Sbjct: 252 DLWIIPIAIFLVSL 265
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 397 DIWTIPLTTFLVPM 438
D+W IP+ FLV +
Sbjct: 252 DLWIIPIAIFLVSL 265
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 397 DIWTIPLTTFLVPM 438
D+W IP+ FLV +
Sbjct: 252 DLWIIPIAIFLVSL 265
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 611 AEIIISILTDMDIRRVEVMQTLGIIMQNMVVRQPR 715
+++I I TD D + G I QN++ +QP+
Sbjct: 23 SDVIEVIETDPDFHESTMFNGGGEIPQNIIQQQPQ 57
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 213 QRLTRW*SMLGSY 175
+RLTRW +LG Y
Sbjct: 688 ERLTRWTLILGQY 700
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 21.4 bits (43), Expect = 7.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 164 KREVYDPNIDHHRVKRCCEYEKSRKRRSPAAEHQ 265
KRE Y PN+ KR + +K +S HQ
Sbjct: 153 KREYYWPNMYRTIKKRLRSCDLCQKTKSSNRPHQ 186
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,021
Number of Sequences: 336
Number of extensions: 3317
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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