Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0607
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    27   0.79 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.7  

>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 515 TVVNVDGPAPIHSGPLTQSPKKLDGGDLY 601
           ++ +  G  P+H   L+  P++LDGG  Y
Sbjct: 69  SIAHKAGAGPLHDKLLSPVPQRLDGGAAY 97


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 361 IIKGTQCLLSPQDIWTIPLTTFLVPMFRSK 450
           +++G + L  P D W  PLT+ L     SK
Sbjct: 237 LVRGLERLNEPVDKWDTPLTSLLFYKLDSK 266


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 481 DSDGDKFIWAALSGTWAPE 425
           DS G  F+W    G W+ E
Sbjct: 83  DSSGIIFVWIKYEGRWSVE 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,284
Number of Sequences: 2352
Number of extensions: 14417
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)