Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0606
         (729 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ176868-1|AAZ85145.1| 1208|Homo sapiens RecQ protein-like 4 pro...    31   3.2  
BC013277-1|AAH13277.2|  652|Homo sapiens RECQL4 protein protein.       31   3.2  
BC011602-1|AAH11602.2|  741|Homo sapiens RECQL4 protein protein.       31   3.2  
AB026546-1|BAA86899.1| 1208|Homo sapiens RECQL4 helicase protein.      31   3.2  
AB006532-1|BAA74453.1| 1208|Homo sapiens DNA helicase protein.         31   3.2  

>DQ176868-1|AAZ85145.1| 1208|Homo sapiens RecQ protein-like 4 protein.
          Length = 1208

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 108  KTILCNFLGFTILKRERSLKTKLRREFYKFHFIEIP 215
            K  +C+FL   +  RER    +LRR F  FH +  P
Sbjct: 1048 KDQICDFLYGRVQARERQALARLRRTFQAFHSVAFP 1083


>BC013277-1|AAH13277.2|  652|Homo sapiens RECQL4 protein protein.
          Length = 652

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 108 KTILCNFLGFTILKRERSLKTKLRREFYKFHFIEIP 215
           K  +C+FL   +  RER    +LRR F  FH +  P
Sbjct: 492 KDQICDFLYGRVQARERQALARLRRTFQAFHSVAFP 527


>BC011602-1|AAH11602.2|  741|Homo sapiens RECQL4 protein protein.
          Length = 741

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 108 KTILCNFLGFTILKRERSLKTKLRREFYKFHFIEIP 215
           K  +C+FL   +  RER    +LRR F  FH +  P
Sbjct: 581 KDQICDFLYGRVQARERQALARLRRTFQAFHSVAFP 616


>AB026546-1|BAA86899.1| 1208|Homo sapiens RECQL4 helicase protein.
          Length = 1208

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 108  KTILCNFLGFTILKRERSLKTKLRREFYKFHFIEIP 215
            K  +C+FL   +  RER    +LRR F  FH +  P
Sbjct: 1048 KDQICDFLYGRVQARERQALARLRRTFQAFHSVAFP 1083


>AB006532-1|BAA74453.1| 1208|Homo sapiens DNA helicase protein.
          Length = 1208

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 108  KTILCNFLGFTILKRERSLKTKLRREFYKFHFIEIP 215
            K  +C+FL   +  RER    +LRR F  FH +  P
Sbjct: 1048 KDQICDFLYGRVQARERQALARLRRTFQAFHSVAFP 1083


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,478,623
Number of Sequences: 237096
Number of extensions: 1577364
Number of successful extensions: 3037
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3037
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)