Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0604
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.9  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 355 LTNNPKGIFNMPYLVSEHFRID 290
           +TN  KG++NM  L   H R D
Sbjct: 449 VTNEIKGVYNMTNLKFYHRRDD 470


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 109 LI*ASCSLISWRRSIGLMTLRQYQL 183
           LI  S  +ISW   IG+M L QY L
Sbjct: 176 LITYSLCVISWAVGIGIM-LAQYYL 199


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 109 LI*ASCSLISWRRSIGLMTLRQYQL 183
           LI  S  +ISW   IG+M L QY L
Sbjct: 176 LITYSLCVISWAVGIGIM-LAQYYL 199


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 531 EQFKKNNPSFF 563
           EQ+K+ NPS F
Sbjct: 122 EQYKRENPSIF 132


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 154 QSIFAMKSMNSLLKLRDNLQVRRFCNPTGTCD 59
           +SI  + ++NS+     NL+++RF    G  D
Sbjct: 344 ESIKPLLTLNSVPTEIYNLEIQRFIQQIGNSD 375


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,114
Number of Sequences: 336
Number of extensions: 3663
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)