SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0604
         (711 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048971-1|AAH48971.1|  134|Homo sapiens SCD5 protein protein.         55   2e-07
AL831891-1|CAD38567.1|  160|Homo sapiens hypothetical protein pr...    55   2e-07
AF389338-1|AAP31443.1|  330|Homo sapiens acyl-CoA-desaturase pro...    55   2e-07
Y13647-1|CAA73998.1|  359|Homo sapiens stearoyl CoA desaturase p...    53   1e-06
BC062303-1|AAH62303.1|  359|Homo sapiens stearoyl-CoA desaturase...    51   4e-06
BC005807-1|AAH05807.1|  355|Homo sapiens SCD protein protein.          51   4e-06
AL139819-4|CAH72824.1|  359|Homo sapiens stearoyl-CoA desaturase...    51   4e-06
AK222862-1|BAD96582.1|  359|Homo sapiens stearoyl-CoA desaturase...    51   4e-06
AF097514-1|AAD29870.1|  359|Homo sapiens stearoyl-CoA desaturase...    51   4e-06
AB208982-1|BAD92219.1|  366|Homo sapiens stearoyl-CoA desaturase...    51   4e-06
AB032261-1|BAA93510.1|  359|Homo sapiens stearoyl-CoA desaturase...    51   4e-06

>BC048971-1|AAH48971.1|  134|Homo sapiens SCD5 protein protein.
          Length = 134

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAELG 99
           PR+N  V+L  +GEGFHNYHHTFP+DY  +E G
Sbjct: 60  PRQNPLVALGAIGEGFHNYHHTFPFDYSASEFG 92



 Score = 33.5 bits (73), Expect = 0.76
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 102 LSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGS 224
           L+ N +  FIDFM  +  A D K  +  +I+ R  RTGD S
Sbjct: 93  LNFNPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDSS 133


>AL831891-1|CAD38567.1|  160|Homo sapiens hypothetical protein
           protein.
          Length = 160

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAELG 99
           PR+N  V+L  +GEGFHNYHHTFP+DY  +E G
Sbjct: 86  PRQNPLVALGAIGEGFHNYHHTFPFDYSASEFG 118



 Score = 33.5 bits (73), Expect = 0.76
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 102 LSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGS 224
           L+ N +  FIDFM  +  A D K  +  +I+ R  RTGD S
Sbjct: 119 LNFNPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDSS 159


>AF389338-1|AAP31443.1|  330|Homo sapiens acyl-CoA-desaturase
           protein.
          Length = 330

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAELG 99
           PR+N  V+L  +GEGFHNYHHTFP+DY  +E G
Sbjct: 256 PRQNPLVALGAIGEGFHNYHHTFPFDYSASEFG 288



 Score = 33.5 bits (73), Expect = 0.76
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 102 LSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGS 224
           L+ N +  FIDFM  +  A D K  +  +I+ R  RTGD S
Sbjct: 289 LNFNPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDSS 329


>Y13647-1|CAA73998.1|  359|Homo sapiens stearoyl CoA desaturase
           protein.
          Length = 359

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAELGDYPLI*ASCSLISWRRSIGL 159
           PR N  VSL  +GEGFHNYHH+FP+DY  +E   +  I  +   I W  ++GL
Sbjct: 282 PRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWH--INFNTFFIDWMAALGL 332



 Score = 43.2 bits (97), Expect = 0.001
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = +3

Query: 96  WRLSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGSH 227
           +R  +N +  FID+MA +   YD K VS   I  R KRTGDG++
Sbjct: 313 YRWHINFNTFFIDWMAALGLTYDRKKVSKAAILARIKRTGDGNY 356


>BC062303-1|AAH62303.1|  359|Homo sapiens stearoyl-CoA desaturase
           (delta-9-desaturase) protein.
          Length = 359

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAE 93
           PR N  VSL  +GEGFHNYHH+FP+DY  +E
Sbjct: 282 PRENILVSLGAVGEGFHNYHHSFPYDYSASE 312



 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +3

Query: 96  WRLSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGSH 227
           +R  +N +  FID MA +  AYD K VS   I  R KRTGDG++
Sbjct: 313 YRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNY 356


>BC005807-1|AAH05807.1|  355|Homo sapiens SCD protein protein.
          Length = 355

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAE 93
           PR N  VSL  +GEGFHNYHH+FP+DY  +E
Sbjct: 282 PRENILVSLGAVGEGFHNYHHSFPYDYSASE 312



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 21/43 (48%), Positives = 26/43 (60%)
 Frame = +3

Query: 96  WRLSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGS 224
           +R  +N +  FID MA +  AYD K VS   I  R KRTGDG+
Sbjct: 313 YRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGN 355


>AL139819-4|CAH72824.1|  359|Homo sapiens stearoyl-CoA desaturase
           (delta-9-desaturase) protein.
          Length = 359

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAE 93
           PR N  VSL  +GEGFHNYHH+FP+DY  +E
Sbjct: 282 PRENILVSLGAVGEGFHNYHHSFPYDYSASE 312



 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +3

Query: 96  WRLSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGSH 227
           +R  +N +  FID MA +  AYD K VS   I  R KRTGDG++
Sbjct: 313 YRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNY 356


>AK222862-1|BAD96582.1|  359|Homo sapiens stearoyl-CoA desaturase
           variant protein.
          Length = 359

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAE 93
           PR N  VSL  +GEGFHNYHH+FP+DY  +E
Sbjct: 282 PRENILVSLGAVGEGFHNYHHSFPYDYSASE 312



 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +3

Query: 96  WRLSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGSH 227
           +R  +N +  FID MA +  AYD K VS   I  R KRTGDG++
Sbjct: 313 YRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNY 356


>AF097514-1|AAD29870.1|  359|Homo sapiens stearoyl-CoA desaturase
           protein.
          Length = 359

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAE 93
           PR N  VSL  +GEGFHNYHH+FP+DY  +E
Sbjct: 282 PRENILVSLGAVGEGFHNYHHSFPYDYSASE 312



 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +3

Query: 96  WRLSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGSH 227
           +R  +N +  FID MA +  AYD K VS   I  R KRTGDG++
Sbjct: 313 YRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNY 356


>AB208982-1|BAD92219.1|  366|Homo sapiens stearoyl-CoA desaturase
           variant protein.
          Length = 366

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAE 93
           PR N  VSL  +GEGFHNYHH+FP+DY  +E
Sbjct: 289 PRENILVSLGAVGEGFHNYHHSFPYDYSASE 319



 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +3

Query: 96  WRLSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGSH 227
           +R  +N +  FID MA +  AYD K VS   I  R KRTGDG++
Sbjct: 320 YRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNY 363


>AB032261-1|BAA93510.1|  359|Homo sapiens stearoyl-CoA desaturase
           protein.
          Length = 359

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAE 93
           PR N  VSL  +GEGFHNYHH+FP+DY  +E
Sbjct: 282 PRENILVSLGAVGEGFHNYHHSFPYDYSASE 312



 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +3

Query: 96  WRLSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGSH 227
           +R  +N +  FID MA +  AYD K VS   I  R KRTGDG++
Sbjct: 313 YRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNY 356


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,632,665
Number of Sequences: 237096
Number of extensions: 1910661
Number of successful extensions: 6664
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6664
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -