Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0604
         (711 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...    46   4e-05
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...    46   4e-05
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...    43   2e-04
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...    43   2e-04
AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...    41   0.001
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...    41   0.001
U53180-1|AAK68285.1|  492|Caenorhabditis elegans Hypothetical pr...    32   0.47 
AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF036702-7|AAB88372.1|  360|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF016447-10|AAG24008.1|  314|Caenorhabditis elegans Hypothetical...    28   5.7  
U80952-4|AAB38095.1|  662|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 21/47 (44%), Positives = 32/47 (68%)
 Frame = +1

Query: 22  SLVVLGEGFHNYHHTFPWDYKTAELGDYPLI*ASCSLISWRRSIGLM 162
           S+  +GEG HNYHHTFP DY+T+E  ++  +  +  LI +  SIG++
Sbjct: 257 SIAAVGEGGHNYHHTFPQDYRTSEHAEF--LNWTRVLIDFGASIGMV 301



 Score = 35.5 bits (78), Expect = 0.038
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 108 LNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTG 215
           LN +++ IDF A I   YD KT   +VIQ++ K+ G
Sbjct: 285 LNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 21/47 (44%), Positives = 32/47 (68%)
 Frame = +1

Query: 22  SLVVLGEGFHNYHHTFPWDYKTAELGDYPLI*ASCSLISWRRSIGLM 162
           S+  +GEG HNYHHTFP DY+T+E  ++  +  +  LI +  SIG++
Sbjct: 257 SIAAVGEGGHNYHHTFPQDYRTSEHAEF--LNWTRVLIDFGASIGMV 301



 Score = 35.5 bits (78), Expect = 0.038
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 108 LNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTG 215
           LN +++ IDF A I   YD KT   +VIQ++ K+ G
Sbjct: 285 LNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAE 93
           P  N   ++  +GEG HN+HHTFP DY+T+E
Sbjct: 259 PVENVFTTIAAVGEGGHNFHHTFPQDYRTSE 289


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 1   PRRNQPVSLVVLGEGFHNYHHTFPWDYKTAE 93
           P  N   ++  +GEG HN+HHTFP DY+T+E
Sbjct: 259 PVENVFTTIAAVGEGGHNFHHTFPQDYRTSE 289


>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +1

Query: 22  SLVVLGEGFHNYHHTFPWDYKTAE 93
           ++V +GEG HN+HHTFP DY+ +E
Sbjct: 265 TVVAVGEGGHNFHHTFPQDYRASE 288


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +1

Query: 22  SLVVLGEGFHNYHHTFPWDYKTAE 93
           ++V +GEG HN+HHTFP DY+ +E
Sbjct: 265 TVVAVGEGGHNFHHTFPQDYRASE 288


>U53180-1|AAK68285.1|  492|Caenorhabditis elegans Hypothetical
           protein D1014.7 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +3

Query: 45  IPQLPSHVPVGLQNRRTWRLSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGS 224
           + ++ SH P  +     W +  NL+K  I+   ++ W YD+  V+ +  QK  K+ G  S
Sbjct: 425 LQRMMSHAPFKIIPISKW-IDENLTKQIIN---RVKWVYDVIDVTCEEKQKIYKKHGGIS 480

Query: 225 HPVW 236
            P W
Sbjct: 481 APCW 484


>AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical
           protein C16C4.7 protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +3

Query: 441 HQLFFFELICFLFPYFKQ--NIILFVSSKRLQEQFKKNNPSFFYAKAI 578
           H + F   +CF   + +Q   I LF S  + Q +F   NP FF+  +I
Sbjct: 279 HLVLFVLFLCFYGEFRRQIRGISLFPSFIQYQPRFSPENPLFFFEASI 326


>AF036702-7|AAB88372.1|  360|Caenorhabditis elegans Hypothetical
           protein F33D4.4 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 16  PVSLVVLGEGFHNYHHTFPW 75
           P+++VV   G+H  HH FP+
Sbjct: 249 PINMVVFNVGYHVEHHDFPY 268


>AF016447-10|AAG24008.1|  314|Caenorhabditis elegans Hypothetical
           protein C54F6.3 protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 429 RDYLHQLFFFELICFLF 479
           RDYLH+++FF+ + F F
Sbjct: 279 RDYLHKIYFFDYLVFQF 295


>U80952-4|AAB38095.1|  662|Caenorhabditis elegans Hypothetical
           protein F54H5.5 protein.
          Length = 662

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/62 (22%), Positives = 33/62 (53%)
 Frame = +3

Query: 462 LICFLFPYFKQNIILFVSSKRLQEQFKKNNPSFFYAKAIRREVIFNNLFLFVCNVSKCQT 641
           L+ +  P+F QN+++ VS   +QE +  +  + F  + ++ ++   +   F+C V+   T
Sbjct: 246 LLIYPVPFFAQNLVIDVSRNAIQE-YVSSMSTHFKDEILKAKLPPMDASRFICGVTLKDT 304

Query: 642 LI 647
            +
Sbjct: 305 TV 306


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,595,706
Number of Sequences: 27780
Number of extensions: 315240
Number of successful extensions: 668
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)