Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0603
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.7  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 285 VSICFFPNYQSTPNTFSVLFIFI 217
           V+I FF +YQ    T+S+  +F+
Sbjct: 160 VTIIFFASYQYGTKTYSLFIVFM 182


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 285 VSICFFPNYQSTPNTFSVLFIFI 217
           V+I FF +YQ    T+S+  +F+
Sbjct: 160 VTIIFFASYQYGTKTYSLFIVFM 182


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = -1

Query: 295 ILTCFDMFLSKLSKHPQHLQCTFYLYSLQ 209
           IL C   F       P H  C F LY L+
Sbjct: 294 ILLCIYYFCRAFIIFPTHFYCAFSLYPLK 322


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 54  WLIQI*LILFSTVVFFNI 1
           W + I L+L ++V+FF++
Sbjct: 139 WAVTIFLVLAASVIFFDV 156


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 576 NIDPSKFIEVQPKFLNSEISR 638
           N  P+ + ++QP +LNS+ ++
Sbjct: 304 NYAPTYYGQMQPDYLNSQTTQ 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,123
Number of Sequences: 336
Number of extensions: 2620
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)