BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0603
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 24 5.3
AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein. 24 5.3
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 23.8 bits (49), Expect = 5.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 258 QSTPNTFSVLFIFILYRFNSPI 193
QS P+T + + +F+ R N P+
Sbjct: 103 QSNPDTLTAMAVFVRDRVNGPL 124
>AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein.
Length = 576
Score = 23.8 bits (49), Expect = 5.3
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +3
Query: 330 LEQLTASKSKKKSKRIGNSESYIPENNLEYLKLATQNKKAIIDEQLLETTSKTIPH*RNK 509
L++L + R+ ES+ NLE L L+ A + L TT+ + RN
Sbjct: 179 LQRLRVLNLRGNILRMLQRESFANLTNLEQLDLSYNYISAWNQQILTTTTALQSVNLRNN 238
Query: 510 SDDIMSRAMLHN 545
S I++ ML++
Sbjct: 239 SIVILTTDMLYD 250
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,889
Number of Sequences: 2352
Number of extensions: 9034
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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