Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0603
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-424|AAF47622.2| 1076|Drosophila melanogaster CG32301-PA...    29   4.6  
AY052076-1|AAK93500.1| 1838|Drosophila melanogaster SD03094p pro...    29   6.1  
AE014296-2429|AAF49705.2| 1833|Drosophila melanogaster CG9311-PA...    29   6.1  
BT022443-1|AAY54859.1|  255|Drosophila melanogaster IP08012p pro...    29   8.0  
AE014134-473|AAF51207.1|  242|Drosophila melanogaster CG15399-PA...    29   8.0  

>AE014296-424|AAF47622.2| 1076|Drosophila melanogaster CG32301-PA
           protein.
          Length = 1076

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
 Frame = -1

Query: 574 EFVGPS-AGILLCSIALDIISSDLFLQ*GIVFEVVSSNCSSIIAFLF*VANFKYSKLFSG 398
           E VG + A +++ S+ L II   L ++ G+   ++ S+  ++ A+ +  A  +      G
Sbjct: 670 ETVGVTYAVVIVLSLMLVIIGIPLIIKLGVGLAILGSHVITVHAY-YGFAFERSQTTNIG 728

Query: 397 IYDSXXXXXXXXXXXFEAVSCSSFLNFLLKISNFILTCFD 278
           +  S              V    +LN++LK S F+  CF+
Sbjct: 729 VTSSLAHSWYMVAFFIVVVVREGYLNYILKASYFMSMCFE 768


>AY052076-1|AAK93500.1| 1838|Drosophila melanogaster SD03094p protein.
          Length = 1838

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 682  GTTCSSSKTSNPVSCRDISEFKNFGWTSINLLGSMFE 572
            G  C+S    N  +C D+S  +NF W S+++  S+ E
Sbjct: 1443 GPKCAS--LDNLSNCSDLSSLENFDWDSVSVTHSVSE 1477


>AE014296-2429|AAF49705.2| 1833|Drosophila melanogaster CG9311-PA
            protein.
          Length = 1833

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 682  GTTCSSSKTSNPVSCRDISEFKNFGWTSINLLGSMFE 572
            G  C+S    N  +C D+S  +NF W S+++  S+ E
Sbjct: 1438 GPKCAS--LDNLSNCSDLSSLENFDWDSVSVTHSVSE 1472


>BT022443-1|AAY54859.1|  255|Drosophila melanogaster IP08012p
           protein.
          Length = 255

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 270 FPNYQSTPNTFSVLFIFILYRFNSPIRCCYQ 178
           +P  +STP T ++L+    Y  NS  R C Q
Sbjct: 96  YPYMRSTPTTTNILYFVEFYDLNSDWRMCRQ 126


>AE014134-473|AAF51207.1|  242|Drosophila melanogaster CG15399-PA
           protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 270 FPNYQSTPNTFSVLFIFILYRFNSPIRCCYQ 178
           +P  +STP T ++L+    Y  NS  R C Q
Sbjct: 83  YPYMRSTPTTTNILYFVEFYDLNSDWRMCRQ 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,235,950
Number of Sequences: 53049
Number of extensions: 421350
Number of successful extensions: 1361
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)