Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0601
(671 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 188 4e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 188 4e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 5e-24
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 104 6e-23
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 9e-22
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 86 2e-17
SB_54| Best HMM Match : Actin (HMM E-Value=0) 85 4e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 7e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 52 6e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 7e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 37 0.013
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 33 0.16
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 33 0.21
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 33 0.21
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.21
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 33 0.28
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 31 0.64
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.64
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 31 0.84
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 31 0.84
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 31 0.84
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 31 0.84
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 31 0.84
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 31 0.84
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 2.6
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.6
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 2.6
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 29 2.6
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.6
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 3.4
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 3.4
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.5
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 4.5
SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.0
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 6.0
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 6.0
SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 28 6.0
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_41722| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 28 7.9
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 28 7.9
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 188 bits (458), Expect = 4e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREKMTQIMFETFNTPAMYVAIQA 510
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQA 139
Score = 109 bits (263), Expect = 2e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 106 bits (255), Expect = 1e-23
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYLMKI 671
+VLSLYASGRT GIV+DSGDGV+HTVPIYEGYALP AI+RLDLAGRDLTDYLMKI
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKI 193
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 188 bits (458), Expect = 4e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 418 APLNPKANREKMTQIMFETFNTPAMYVAIQA 510
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQA 138
Score = 107 bits (257), Expect = 8e-24
Identities = 50/55 (90%), Positives = 53/55 (96%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYLMKI 671
+VLSLYASGRT GIV+DSGDGV+HTVPIYEGYALP AILRLDLAGRDLTDYLMKI
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 192
Score = 107 bits (256), Expect = 1e-23
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 188 bits (458), Expect = 4e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 418 APLNPKANREKMTQIMFETFNTPAMYVAIQA 510
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQA 138
Score = 108 bits (259), Expect = 5e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 107 bits (257), Expect = 8e-24
Identities = 50/55 (90%), Positives = 53/55 (96%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYLMKI 671
+VLSLYASGRT GIV+DSGDGV+HTVPIYEGYALP AILRLDLAGRDLTDYLMKI
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 192
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 188 bits (458), Expect = 4e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREKMTQIMFETFNTPAMYVAIQA 510
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQA 139
Score = 114 bits (274), Expect = 7e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 107 bits (257), Expect = 8e-24
Identities = 50/55 (90%), Positives = 53/55 (96%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYLMKI 671
+VLSLYASGRT GIV+DSGDGV+HTVPIYEGYALP AILRLDLAGRDLTDYLMKI
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 188 bits (458), Expect = 4e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREKMTQIMFETFNTPAMYVAIQA 510
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQA 139
Score = 109 bits (263), Expect = 2e-24
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 60.9 bits (141), Expect = 9e-10
Identities = 29/35 (82%), Positives = 32/35 (91%), Gaps = 2/35 (5%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYE--GYA 605
+VLSLYASGRT GIV+DSGDGVSHTVPIYE GY+
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 108 bits (259), Expect = 5e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 106 bits (255), Expect = 1e-23
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYLMKI 671
+VLSLYASGRT GIV+DSGDGV+HTVPIYEGYALP AI+RLDLAGRDLTDYLMKI
Sbjct: 101 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKI 155
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 366
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 439 NREKMTQIMFETFNTPAMYVAIQA 510
N + M +IMFETFN+PAMYVAIQA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQA 101
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 104 bits (250), Expect = 6e-23
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYLMKI 671
+VLSLYASGRT G+V DSGDGVSH VPIYEGYALP AILRLDLAGRDLTDYLMK+
Sbjct: 17 AVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKL 71
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 460 IMFETFNTPAMYVAIQA 510
IMFE FN+PA+YVAIQA
Sbjct: 1 IMFEAFNSPAVYVAIQA 17
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 100 bits (240), Expect = 9e-22
Identities = 46/99 (46%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +1
Query: 217 SGRDGRYGTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 393
S + G + L VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 394 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 510
VLLTE PLNP NREKM ++MFE + +Y+AIQA
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQA 142
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYLMKI 671
+VL+LYA G G+V+DSGDGV+H P+YEG+ALP RLD+AGRD+T YL+K+
Sbjct: 142 AVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKL 196
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 113 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 211
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 86.2 bits (204), Expect = 2e-17
Identities = 36/52 (69%), Positives = 48/52 (92%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYL 662
+VLSLYA+GRT G+VLD+GDGVSH+VPIYEG+A+P +I+R D+AGRD++ YL
Sbjct: 164 AVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYL 215
Score = 64.9 bits (151), Expect = 6e-11
Identities = 25/39 (64%), Positives = 34/39 (87%)
Frame = +1
Query: 394 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 510
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQA 164
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYLMKI 671
+V++LYASGRT G V D GDGVSHTVP+Y+GY LP A R+DLAGRDLT YL ++
Sbjct: 2183 AVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRL 2237
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +1
Query: 346 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 510
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QA
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQA 2183
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 220
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +1
Query: 304 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 483
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 484 PAMYV 498
PA ++
Sbjct: 63 PAFFL 67
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = +3
Query: 507 SVLSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLT 653
SVL+ +A+GR+NG+V+DSG + VP+++GY L QAI+R LAG +T
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFIT 119
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 220
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 220 GRDGRYGTEGL--FVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 393
GR + G E L F+GDEA K T K+PI H IV +WD ME+ W + LR PE
Sbjct: 273 GRSAK-GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPE 330
Query: 394 EHPVLL 411
+H LL
Sbjct: 331 DHYFLL 336
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVPI 590
G V+DSGDGV+H +P+
Sbjct: 357 GCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 51.6 bits (118), Expect = 6e-07
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYLMKI 671
G V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++
Sbjct: 63 GCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQL 105
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 89 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 235
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +3
Query: 513 LSLYASGRTNGIVLDSGDGVSHTVPIYEGYALPQAILRLDLAGRDLTDYL 662
LSLYASG T G+ L SG + IYEG+ L + L++ G LT+ L
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENL 819
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 217 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 101
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 220 GRDGRYGTEGLFVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 390
GR G + GL VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 391 EEHPVLLTEAPLNPKANRE 447
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 250 LFVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 375
LF+GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 272 LFIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 107 EVAALVVDNGSGMCKAGFAGDDAPRAV 187
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +1
Query: 520 CTRPVVPTVSCWTPATVSPTPC-----PSTRDTHS-PKPS 621
CT+ +P+ +TP T TPC PST +H+ PKP+
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAPPKPT 898
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 454 TQIMFETFNTPAMYVAIQACSRCTRPVVPTVSCWTPATVSPTP 582
+Q+ E +N P+ + + CT +P +TP T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTP 653
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 506 KRALAVRVRSYQRYRAGLRRRCLPHRAHLRGIRTPPSHPASGLSRSRPHRLPHE 667
K+++ R +R R G R+ P + G TPP PA+ RL HE
Sbjct: 934 KKSIRDSFRRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 532 VVPTVSCWTPATVSPTPCPSTRDTHSPKPSCVWT*PVATSQTTS 663
V T+S +P T + P + +T P PS T P AT+ T S
Sbjct: 4 VTSTLSAGSPVTAPSSTRPPSPNTRPPSPSTTATLPSATNSTQS 47
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C +++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/87 (26%), Positives = 30/87 (34%)
Frame = +1
Query: 400 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPTVSCWTPATVSPT 579
P T P P T +T TP P PT + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 580 PCPSTRDTHSPKPSCVWT*PVATSQTT 660
T+ T + P+ P A + TT
Sbjct: 88 TSTLTKPTPATTPTPTKPTPTAHTPTT 114
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +1
Query: 472 TFNTPAMYVAIQACSRCTRPVVPTVSCWTPATVSPTPCPSTRDTHSPKPSCVWT*PVATS 651
T TP + A + P PT + TP SPT ST T + P+ P A +
Sbjct: 9 TLTTPTLTKATPQTT--PTPTKPTPTTHTPTKPSPTTPTSTAPTQT-TPTPTTPSPTAPT 65
Query: 652 QTT 660
QTT
Sbjct: 66 QTT 68
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 523 TRPVVPTVSCWTPATVSPTPCPSTRDTHSPKPS 621
TRP VPT +T PTP P T P P+
Sbjct: 932 TRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 112 NFFVAHLE 89
V L+
Sbjct: 152 QVDVLLLD 159
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 112 NFFVAHLE 89
V L+
Sbjct: 152 QVDVLLLD 159
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 112 NFFVAHLE 89
V L+
Sbjct: 185 QVDVLLLD 192
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 112 NFFVAHLE 89
V L+
Sbjct: 102 QVDVLLLD 109
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 112 NFFVAHLE 89
V L+
Sbjct: 774 QVDVLLLD 781
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
L C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 112 NFFVAHLE 89
V L+
Sbjct: 858 QVDVLLLD 865
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 520 CTRPVVPTVSCWTPATVSPTPCPSTRDTHSPKPSCVWT*P 639
CT PT++ P T + T P T+ P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Frame = +1
Query: 373 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVP 540
E APE V T AP + P+ +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 541 TVSCWTPATVSPTPCPSTRDTHSPK----PSCVWT*PVATS 651
+ + TV+P + T +P+ P W P TS
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTWA-PETTS 1422
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -2
Query: 265 HLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
H++ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 412 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPTVSCWTPATVSPTP 582
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 583 CPSTRDTHSPK 615
+T T +P+
Sbjct: 575 TAATEITAAPE 585
>SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 129 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 172
>SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 931
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 470 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 513
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -1
Query: 398 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS--PTKSPSVPYRPS 225
CS + + C + ++V CS + V + ++C+ P + PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 224 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 132
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 277 CSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNF 107
C +++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 465 CLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQV 523
Query: 106 FVAHLE 89
V L+
Sbjct: 524 DVLLLD 529
>SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 411
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 78 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 121
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 420 SPQPQGQQREDDPDHVRNIQHARHVRRHPS 509
SP P+ R D+P V A HV HPS
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPS 294
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 1196 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1239
>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2124
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 1860 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1903
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 523 TRPVVPTVSCWTPATVSPTPCPSTRDTHSPKPS 621
T P PT + TP T + TP +P P+
Sbjct: 140 TTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 180 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 223
>SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 70 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 113
>SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 148 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 191
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
L C +++ ++LSH + H D +HG RS SCET L
Sbjct: 209 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 252
>SB_41722| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 343
Score = 27.9 bits (59), Expect = 7.9
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 2/109 (1%)
Frame = +2
Query: 344 RRFGIIPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKRALAV 523
R+ I P T PP NT + + PP S RA +
Sbjct: 140 RQSQIPPWTAPEQEPPNNTPPWTAPEPFPPVDSARAGSSMDKARARSPPVDSA--RARSP 197
Query: 524 RVRSYQRYRAGLRRRCLPHRAHLRG-IRTPPSHPASGLSRSR-PHRLPH 664
RVR RY +G R+ +P R + + + P +R+R P R H
Sbjct: 198 RVRHQARYHSGQRQSQIPPGTRARSPVDSAKARPPVDSARARYPRRQRH 246
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
L C ++ ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 317 PCSMGYLRVRIPLLLCASSPTKSPSVPY 234
P ++ +L PLL+ +SP SP++P+
Sbjct: 16 PPTIPFLAATTPLLMVTTSPLTSPTIPF 43
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 317 PCSMGYLRVRIPLLLCASSPTKSPSVPY 234
P ++ +L PLL+ +SP SP++P+
Sbjct: 82 PPTIPFLATTTPLLMVTTSPLPSPTIPF 109
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/85 (24%), Positives = 32/85 (37%)
Frame = +1
Query: 361 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVP 540
T E VAPE + E ++P+ T + ET TP VA + V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 541 TVSCWTPATVSPTPCPSTRDTHSPK 615
+ TV+P + T +P+
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAPE 4264
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,463,270
Number of Sequences: 59808
Number of extensions: 608988
Number of successful extensions: 2307
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 1897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2279
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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