Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0599
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    26   0.32 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   0.99 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   3.0  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.0  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.3  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   7.0  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.2  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 402 PSHSDQLIKHTSQNFSSSNNCNTNIYRLFNTH 307
           P  SD  +    Q FSSS  CN + Y   + H
Sbjct: 128 PGPSDPSVSSCHQGFSSSTWCNYSAYSSASRH 159


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 VYICIAVIGTAEVLRCMLYQLVGMRGHIL 411
           +YI + VIGT   +  + Y ++ +  HI+
Sbjct: 229 IYIQVIVIGTKNTIETVAYSVIFILWHIV 257


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -1

Query: 363 NFSSSNNCNTNIYRLFNTHIIFNFIFQYIRFYIH 262
           N     NC     R+F  +I+F  IF   R  I+
Sbjct: 140 NLIRLKNCVIYFNRIFGWNILFGHIFTVCRTLIY 173


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 54  IVNH*NKIMECGFEKGTIKLDSIRNVF 134
           IV H  +  E  F++   +LDSIRN+F
Sbjct: 55  IVTH--QAYELWFKQIIYELDSIRNIF 79


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 54  IVNH*NKIMECGFEKGTIKLDSIRNVF 134
           IV H  +  E  F++   +LDSIRN+F
Sbjct: 55  IVTH--QAYELWFKQIIYELDSIRNIF 79


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -2

Query: 554 KNLYKTYSEILFL 516
           KNL+K+YS++L L
Sbjct: 14  KNLHKSYSKMLIL 26


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -2

Query: 554 KNLYKTYSEILFL 516
           KNL+K+YS++L L
Sbjct: 14  KNLHKSYSKMLIL 26


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 81  ECGFEKGTIKLDSIRNVF 134
           E  F++   +LDSIRN+F
Sbjct: 2   ELWFKQIIYELDSIRNIF 19


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 125 KCVLFWSNCNGKCKFY 172
           KC +FW+  NG+   Y
Sbjct: 107 KCDVFWNCWNGEASRY 122


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 125 KCVLFWSNCNGKCKFY 172
           KC +FW+  NG+   Y
Sbjct: 107 KCDVFWNCWNGEASRY 122


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 275 RMYWKIKLNIICVLNNLYIFVLQLLELLKF 364
           R+ WK    +  V N    FV+ L  +LKF
Sbjct: 60  RLEWKSFRFVYAVYNIFGAFVMGLFCILKF 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,224
Number of Sequences: 336
Number of extensions: 3600
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)