Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0599
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    24   1.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   2.7  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   4.7  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   4.7  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   4.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.1  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 405 MPSHSDQLIKHTSQNFSSSNNCNTNIYR 322
           +P+H+    K    + +++NN NTN Y+
Sbjct: 119 VPNHTSDQHKWFQMSINNTNNNNTNKYK 146


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 259 TITQLMCTLI*AAPVDC 209
           TI  + C L+ A+P+DC
Sbjct: 5   TIVTVACLLLAASPIDC 21


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 490 IYSNICPRIKNNISEY 537
           ++SN+ P+   NI EY
Sbjct: 359 LFSNVTPKFPRNIDEY 374


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 450 NKHNHNTSLARKR*NMPSHSDQLIKHTSQNFSSSNNCNTN 331
           N +NHN + AR      + ++      + + S SNN + N
Sbjct: 423 NHYNHNHNQARHSSKSDNQNNNQHNDQAHHSSKSNNRHNN 462


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 347 ITAIQIYTDYLTHILYLILFSSTYVFTFTNH 255
           +T I I+  Y+  ++++ILF S  + +  NH
Sbjct: 221 VTCIFIWA-YVIPLIFIILFYSRLLSSIRNH 250


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 347 ITAIQIYTDYLTHILYLILFSSTYVFTFTNH 255
           +T I I+  Y+  ++++ILF S  + +  NH
Sbjct: 221 VTCIFIWA-YVIPLIFIILFYSRLLSSIRNH 250


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -2

Query: 377  SIHLKTSAVPITAIQIYTDYLTHILYLILFSSTYVFTFTNHYPI 246
            ++H +T+   +  +Q+     +H L  +L  +TY    T+H  I
Sbjct: 1438 TLHYRTAHGNLDELQLSRHATSHELKGLLCGNTYQLYLTSHNKI 1481


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -2

Query: 377  SIHLKTSAVPITAIQIYTDYLTHILYLILFSSTYVFTFTNHYPI 246
            ++H +T+   +  +Q+     +H L  +L  +TY    T+H  I
Sbjct: 1434 TLHYRTAHGNLDELQLSRHATSHELKGLLCGNTYQLYLTSHNKI 1477


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 496 SNICPRIKNNISEYVLYK 549
           S IC  +K N+ E+ LY+
Sbjct: 190 SAICAMLKENMPEFPLYQ 207


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,460
Number of Sequences: 438
Number of extensions: 4272
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)