Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0596
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   6.0  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +1

Query: 49  RCIKFTVFYSSVLREDSFMYHLYWCL 126
           R + F + ++S+ R+ SF+ +LY+ L
Sbjct: 799 RTLGFILRFTSIFRDQSFLRNLYYAL 824


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 453 GTPPGIAVELRPGDKAPPKVG 391
           G PPG  +   PG+  PP+ G
Sbjct: 184 GMPPGPQMMRPPGNVGPPRTG 204


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 672  QQEARVTKHPLQHHHLRALNPMLVW*SSRH 761
            QQ  +  +H LQHHH   L+      SS H
Sbjct: 1320 QQHQQHQQHQLQHHHQPQLSQSSHHSSSSH 1349


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,336
Number of Sequences: 2352
Number of extensions: 14052
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)