Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0596
         (777 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U75467-2|AAB18342.1|  579|Drosophila melanogaster Rga protein.         69   1e-11
AE014297-301|AAN13250.1|  579|Drosophila melanogaster CG2161-PB,...    69   1e-11
BT025208-1|ABF17899.1|  585|Drosophila melanogaster FI01108p pro...    58   1e-08
AY094772-1|AAM11125.1|  585|Drosophila melanogaster GM14102p pro...    58   1e-08
AE014297-302|AAF51992.2|  585|Drosophila melanogaster CG2161-PA,...    58   1e-08
AE014297-1208|AAG22141.1|  503|Drosophila melanogaster CG4655-PA...    33   0.58 
AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-P...    29   9.4  

>U75467-2|AAB18342.1|  579|Drosophila melanogaster Rga protein.
          Length = 579

 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 41/63 (65%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
 Frame = +2

Query: 590 NNYHSVFGEGG--DTSTPPLLDLSEFPSLT-ARGAGDQ--XXXXXXXXXGSKPYVGMVKQ 754
           NN+H VFG GG  DTSTP LLD +EFPSLT ARG  DQ           GSKPYVGMVKQ
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLPQSNPLQPPGSKPYVGMVKQ 199

Query: 755 PTS 763
           PTS
Sbjct: 200 PTS 202



 Score = 30.7 bits (66), Expect = 2.3
 Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +2

Query: 278 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 448
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALRGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 449 VPHQ 460
            P Q
Sbjct: 59  APQQ 62


>AE014297-301|AAN13250.1|  579|Drosophila melanogaster CG2161-PB,
           isoform B protein.
          Length = 579

 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 41/63 (65%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
 Frame = +2

Query: 590 NNYHSVFGEGG--DTSTPPLLDLSEFPSLT-ARGAGDQ--XXXXXXXXXGSKPYVGMVKQ 754
           NN+H VFG GG  DTSTP LLD +EFPSLT ARG  DQ           GSKPYVGMVKQ
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLPQSNPLQPPGSKPYVGMVKQ 199

Query: 755 PTS 763
           PTS
Sbjct: 200 PTS 202



 Score = 30.7 bits (66), Expect = 2.3
 Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +2

Query: 278 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 448
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 449 VPHQ 460
            P Q
Sbjct: 59  APQQ 62


>BT025208-1|ABF17899.1|  585|Drosophila melanogaster FI01108p
           protein.
          Length = 585

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 40/69 (57%), Positives = 42/69 (60%), Gaps = 11/69 (15%)
 Frame = +2

Query: 590 NNYHSVFGEGG--DTSTPPLLDLSEFPSLT-ARGAGDQ--XXXXXXXXXGSKPY------ 736
           NN+H VFG GG  DTSTP LLD +EFPSLT ARG  DQ           GSKPY      
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLPQSNPLQPPGSKPYGNFFTS 199

Query: 737 VGMVKQPTS 763
            GMVKQPTS
Sbjct: 200 FGMVKQPTS 208



 Score = 30.7 bits (66), Expect = 2.3
 Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +2

Query: 278 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 448
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 449 VPHQ 460
            P Q
Sbjct: 59  APQQ 62


>AY094772-1|AAM11125.1|  585|Drosophila melanogaster GM14102p
           protein.
          Length = 585

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 40/69 (57%), Positives = 42/69 (60%), Gaps = 11/69 (15%)
 Frame = +2

Query: 590 NNYHSVFGEGG--DTSTPPLLDLSEFPSLT-ARGAGDQ--XXXXXXXXXGSKPY------ 736
           NN+H VFG GG  DTSTP LLD +EFPSLT ARG  DQ           GSKPY      
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLPQSNPLQPPGSKPYGNFFTS 199

Query: 737 VGMVKQPTS 763
            GMVKQPTS
Sbjct: 200 FGMVKQPTS 208



 Score = 30.7 bits (66), Expect = 2.3
 Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +2

Query: 278 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 448
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 449 VPHQ 460
            P Q
Sbjct: 59  APQQ 62


>AE014297-302|AAF51992.2|  585|Drosophila melanogaster CG2161-PA,
           isoform A protein.
          Length = 585

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 40/69 (57%), Positives = 42/69 (60%), Gaps = 11/69 (15%)
 Frame = +2

Query: 590 NNYHSVFGEGG--DTSTPPLLDLSEFPSLT-ARGAGDQ--XXXXXXXXXGSKPY------ 736
           NN+H VFG GG  DTSTP LLD +EFPSLT ARG  DQ           GSKPY      
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLPQSNPLQPPGSKPYGNFFTS 199

Query: 737 VGMVKQPTS 763
            GMVKQPTS
Sbjct: 200 FGMVKQPTS 208



 Score = 30.7 bits (66), Expect = 2.3
 Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +2

Query: 278 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 448
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 449 VPHQ 460
            P Q
Sbjct: 59  APQQ 62


>AE014297-1208|AAG22141.1|  503|Drosophila melanogaster CG4655-PA,
           isoform A protein.
          Length = 503

 Score = 32.7 bits (71), Expect = 0.58
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 627 HQHHHFWT*ANFHH*QQEARVTKHPLQHHHLRALNPMLVW 746
           H HHH     + HH QQ+       +QHH    L P+  W
Sbjct: 88  HHHHHHRLQHHHHHHQQQHNHQNQQMQHHWPSRLGPIGPW 127


>AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-PA
           protein.
          Length = 1943

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 633 HHHFWT*ANFHH*QQEARVTKHPLQHHHLRALNP 734
           HHH     N HH QQ+   + H LQH +L + +P
Sbjct: 151 HHHHSNQVNQHHHQQQQ--SHHHLQHANLHSHHP 182


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,232,995
Number of Sequences: 53049
Number of extensions: 638843
Number of successful extensions: 2038
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2019
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)