Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0591
         (487 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54LW8 Cluster: Putative uncharacterized protein; n=1; ...    33   2.6  
UniRef50_Q9SQW9 Cluster: Putative retroelement pol polyprotein; ...    33   3.4  
UniRef50_Q4D3R0 Cluster: Mucin-associated surface protein (MASP)...    33   3.4  
UniRef50_Q21LW9 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_A1SVJ6 Cluster: Putative uncharacterized protein; n=1; ...    32   6.0  
UniRef50_Q4N5Q1 Cluster: Putative uncharacterized protein; n=2; ...    32   6.0  

>UniRef50_Q54LW8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1649

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 23/103 (22%), Positives = 43/103 (41%)
 Frame = +2

Query: 158 SQNGNQSGKRNISKIKKRNSETCFSYKDIREQIYLVEYQHLLERQDI*VRHVLALYLRSY 337
           + N N + K NI+       ETC SY D   ++ ++   +L  +++I V  + +  +   
Sbjct: 374 NNNNNNNNKCNINNSNNSIEETCPSYTDCMYELEIIGLSNLPNQKNIFVDKIKSFLINLS 433

Query: 338 ELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTSDSEAE 466
           E  +  PF+ +   N      +    +  G SE      +E E
Sbjct: 434 ERLS--PFSNNNNNNNNNNNNNNNNNNNNGNSERQFVDQNEEE 474


>UniRef50_Q9SQW9 Cluster: Putative retroelement pol polyprotein;
           n=1; Arabidopsis thaliana|Rep: Putative retroelement pol
           polyprotein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1661

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = +2

Query: 260 LVEYQHLLERQDI*VRHVLALYLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSEN 439
           +VE   L+E Q+   R+ ++  +R+   TNT PFN    T  + +++ PT +    PS +
Sbjct: 371 IVEIAKLIESQE---RNAVSYQVRNQARTNTAPFNNQVSTGSRVVDRAPTRQPFI-PSRD 426

Query: 440 NSTSDSEAE 466
            + +    E
Sbjct: 427 TTRASGSGE 435


>UniRef50_Q4D3R0 Cluster: Mucin-associated surface protein (MASP),
           putative; n=16; Trypanosoma cruzi|Rep: Mucin-associated
           surface protein (MASP), putative - Trypanosoma cruzi
          Length = 367

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 350 TVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTSDSEA 463
           TV    DA T G P   HP +   EG ++  + SD EA
Sbjct: 267 TVALRSDAGTEGTPPTNHPNQPSTEGATQPETNSDGEA 304


>UniRef50_Q21LW9 Cluster: Putative uncharacterized protein; n=1;
           Saccharophagus degradans 2-40|Rep: Putative
           uncharacterized protein - Saccharophagus degradans
           (strain 2-40 / ATCC 43961 / DSM 17024)
          Length = 512

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 17/46 (36%), Positives = 29/46 (63%)
 Frame = +2

Query: 314 LALYLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTS 451
           LALYL+ Y +T ++P++VD+L++     +H  ++  E P  NN  S
Sbjct: 137 LALYLQHYLVTGSLPWHVDSLSS----VEHQWQQLFESPEYNNLAS 178


>UniRef50_A1SVJ6 Cluster: Putative uncharacterized protein; n=1;
           Psychromonas ingrahamii 37|Rep: Putative uncharacterized
           protein - Psychromonas ingrahamii (strain 37)
          Length = 97

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -1

Query: 475 VLHLSFTVACTIVFAGAFYVFFSWMLFYWLTICQCVHIERHSVRQLI 335
           +L +  T A T V    F++F  + LF W TICQ  H   H V  LI
Sbjct: 2   LLEIQSTHAMTAVIGILFFLFALFDLFDWTTICQRFHF--HPVAVLI 46


>UniRef50_Q4N5Q1 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 978

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
 Frame = +2

Query: 146 EIIISQNGNQSG-KRNISKIKKRNSETCFSYK--DIREQIYLVEYQHLLERQDI*VRHVL 316
           +++   N ++SG K+NI  + K ++  C S K  +IR   YL  +  L +  ++    VL
Sbjct: 281 DVVEDSNESESGSKQNIQYVYKNHNSLCISVKSEEIRGDKYLTIFD-LQKNSEMYNVKVL 339

Query: 317 ALYLRSY--ELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSE 436
                 Y       +  NV  LT+ +P+E+H  +  +E   E
Sbjct: 340 KKTENGYVNHEKKLIDLNVTNLTDPKPVEEHSYKHLLEKQGE 381


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,843,671
Number of Sequences: 1657284
Number of extensions: 8154893
Number of successful extensions: 24848
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24825
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)