BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0591 (487 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0984 - 9985300-9985804,9985894-9986933 30 0.86 11_03_0021 + 9010846-9011672,9011753-9013700 29 1.5 11_06_0235 + 21588212-21589029,21589426-21591358 27 6.0 10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 6.0 08_01_0511 + 4459685-4459755,4461553-4463653,4463741-4463808,446... 27 8.0 >12_01_0984 - 9985300-9985804,9985894-9986933 Length = 514 Score = 30.3 bits (65), Expect = 0.86 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2 Query: 363 LKGTVFVSSYERKYNAKTCLTYISCLSRRCWYS 265 +K + +S Y+ Y+ KTCL Y+S W S Sbjct: 1 MKDILLLSYYDLPYHLKTCLLYLSIFPEDYWIS 33 >11_03_0021 + 9010846-9011672,9011753-9013700 Length = 924 Score = 29.5 bits (63), Expect = 1.5 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = -2 Query: 396 SIG*PFVNASTLKGT---VFVSSYERKYNAKTCLTYISCLSRRCWYSTK 259 SIG N+ TL+G + +S Y+ KTCL Y+S C ++K Sbjct: 398 SIGSALENSHTLQGLKKILLLSFYDLPPQLKTCLLYLSIYPEDCMINSK 446 >11_06_0235 + 21588212-21589029,21589426-21591358 Length = 916 Score = 27.5 bits (58), Expect = 6.0 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -2 Query: 342 SSYERKYNAKTCLTYISCLSRRCWYSTK 259 S YE + KTCL ++S CW K Sbjct: 412 SYYELPSHLKTCLLHLSIFPEDCWIEKK 439 >10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741, 16196822-16197001,16197090-16197371,16197471-16199141, 16199257-16199463,16199566-16199700,16199792-16200082, 16200403-16200621,16200876-16201034,16201120-16201181, 16201257-16201383,16201460-16201693,16201777-16202003, 16202163-16202257,16202341-16202468,16202574-16202594, 16202765-16202921,16203007-16203075,16203228-16203341, 16203415-16203491,16203576-16203688,16204432-16204507, 16204592-16204756,16204825-16204952,16205049-16205130, 16205426-16205548,16205633-16205860,16205933-16206034, 16206144-16206341,16206581-16206760,16206868-16207020, 16207690-16207797,16208201-16208355,16208786-16208912, 16209825-16209914,16209986-16210127,16210303-16210379, 16210467-16210582,16210638-16210773,16211130-16211198, 16211279-16211361,16211655-16211720,16211788-16211974, 16212054-16213547,16213635-16214165,16214234-16214363, 16214407-16215878,16216359-16216364,16216750-16217055, 16217364-16217468,16217577-16217772,16217862-16217929, 16218853-16220631,16221026-16221151,16221604-16221780, 16221997-16222128,16223461-16223498,16223710-16223788, 16224175-16224284,16224787-16224935,16225027-16225197, 16225281-16225552,16226355-16226442,16227942-16228369 Length = 5157 Score = 27.5 bits (58), Expect = 6.0 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +2 Query: 323 YLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTS 451 +LRSY LTN+V ++ L I+++P ++GP+ + TS Sbjct: 901 FLRSYVLTNSVTEHIVNLACAVYIKKYPVL--LQGPTSSGKTS 941 >08_01_0511 + 4459685-4459755,4461553-4463653,4463741-4463808, 4465156-4465282,4465379-4465429 Length = 805 Score = 27.1 bits (57), Expect = 8.0 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = -2 Query: 375 NASTLKGTVFVSSYERKYNAKTCLTYIS 292 NA ++ + S Y+ Y+ +TCL Y+S Sbjct: 154 NAGNMRRILSFSYYDLPYHVRTCLLYLS 181 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,586,284 Number of Sequences: 37544 Number of extensions: 209770 Number of successful extensions: 561 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 550 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 561 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 999806640 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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