Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0591
         (487 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L42542-1|AAB00103.1|  655|Homo sapiens RLIP76 protein protein.         29   8.7  
BC013126-1|AAH13126.1|  655|Homo sapiens ralA binding protein 1 ...    29   8.7  
AB209924-1|BAD93161.1|  462|Homo sapiens ralA binding protein 1 ...    29   8.7  

>L42542-1|AAB00103.1|  655|Homo sapiens RLIP76 protein protein.
          Length = 655

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 30/124 (24%), Positives = 50/124 (40%)
 Frame = +2

Query: 107 KLRLSSVLRGQC*EIIISQNGNQSGKRNISKIKKRNSETCFSYKDIREQIYLVEYQHLLE 286
           K +L    R +C E  I+Q      K ++SK +   +E   +    +E   L E + LL 
Sbjct: 440 KRKLREAKRQEC-ETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLA 498

Query: 287 RQDI*VRHVLALYLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTSDSEAE 466
            +   +R  +A      E           +   Q  +QH   +  E  SE+ S S+ E E
Sbjct: 499 MEQF-LRRQIASEKEEIERLRA------EIAEIQSRQQHGRSETEEYSSESESESEDEEE 551

Query: 467 MQYL 478
           +Q +
Sbjct: 552 LQII 555


>BC013126-1|AAH13126.1|  655|Homo sapiens ralA binding protein 1
           protein.
          Length = 655

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 30/124 (24%), Positives = 50/124 (40%)
 Frame = +2

Query: 107 KLRLSSVLRGQC*EIIISQNGNQSGKRNISKIKKRNSETCFSYKDIREQIYLVEYQHLLE 286
           K +L    R +C E  I+Q      K ++SK +   +E   +    +E   L E + LL 
Sbjct: 440 KRKLREAKRQEC-ETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLA 498

Query: 287 RQDI*VRHVLALYLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTSDSEAE 466
            +   +R  +A      E           +   Q  +QH   +  E  SE+ S S+ E E
Sbjct: 499 MEQF-LRRQIASEKEEIERLRA------EIAEIQSRQQHGRSETEEYSSESESESEDEEE 551

Query: 467 MQYL 478
           +Q +
Sbjct: 552 LQII 555


>AB209924-1|BAD93161.1|  462|Homo sapiens ralA binding protein 1
           variant protein.
          Length = 462

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 30/124 (24%), Positives = 50/124 (40%)
 Frame = +2

Query: 107 KLRLSSVLRGQC*EIIISQNGNQSGKRNISKIKKRNSETCFSYKDIREQIYLVEYQHLLE 286
           K +L    R +C E  I+Q      K ++SK +   +E   +    +E   L E + LL 
Sbjct: 247 KRKLREAKRQEC-ETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLA 305

Query: 287 RQDI*VRHVLALYLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTSDSEAE 466
            +   +R  +A      E           +   Q  +QH   +  E  SE+ S S+ E E
Sbjct: 306 MEQF-LRRQIASEKEEIERLRA------EIAEIQSRQQHGRSETEEYSSESESESEDEEE 358

Query: 467 MQYL 478
           +Q +
Sbjct: 359 LQII 362


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,113,464
Number of Sequences: 237096
Number of extensions: 1213590
Number of successful extensions: 2931
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2931
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)