Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0591
         (487 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025457-3|AAB70963.2|  248|Caenorhabditis elegans Hypothetical ...    31   0.59 
AC024843-8|AAM48560.1|  726|Caenorhabditis elegans Hypothetical ...    29   1.4  
AC024843-7|AAF60843.2|  743|Caenorhabditis elegans Hypothetical ...    29   1.4  
Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z70783-11|CAA94860.2|  782|Caenorhabditis elegans Hypothetical p...    27   7.2  
AF047658-5|AAC04416.3|  434|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z70212-10|CAA94169.2|  319|Caenorhabditis elegans Hypothetical p...    27   9.5  
Z50177-8|CAA90548.2|  319|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>AF025457-3|AAB70963.2|  248|Caenorhabditis elegans Hypothetical
           protein C08E3.5 protein.
          Length = 248

 Score = 30.7 bits (66), Expect = 0.59
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +3

Query: 72  KRLWILLEWITENYAYPAYCVVNVEKLSYH-RTEISPGKEILVRLKNGTARRALVIRISG 248
           + + +L+ W+T NY+   +CV  V  + YH R E   G  ++V       R+ +   ++G
Sbjct: 47  RNMKVLINWLTLNYSEKLHCVSIVYNMRYHIRYEQKDGGCVVVYYFGSPKRKEIQKFVAG 106


>AC024843-8|AAM48560.1|  726|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.3c protein.
          Length = 726

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +2

Query: 278 LLERQDI*VRHVLA-LYLRSYELTNTVPFNVDALTNGQPI--EQHPTEKDVEGPSENNST 448
           +++R    +R V+A +Y +  E +  VP  ++   N QP    Q+P + D+  PSE  S 
Sbjct: 360 IIDRFKFLLRMVVADVYYQGTESSMAVPKALETGYNTQPYPPNQYPLDTDIRRPSERPSN 419

Query: 449 SDSEAE 466
             S  E
Sbjct: 420 GPSAEE 425


>AC024843-7|AAF60843.2|  743|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.3a protein.
          Length = 743

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +2

Query: 278 LLERQDI*VRHVLA-LYLRSYELTNTVPFNVDALTNGQPI--EQHPTEKDVEGPSENNST 448
           +++R    +R V+A +Y +  E +  VP  ++   N QP    Q+P + D+  PSE  S 
Sbjct: 360 IIDRFKFLLRMVVADVYYQGTESSMAVPKALETGYNTQPYPPNQYPLDTDIRRPSERPSN 419

Query: 449 SDSEAE 466
             S  E
Sbjct: 420 GPSAEE 425


>Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical
           protein F02D10.6 protein.
          Length = 199

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 149 FLNIDHAIRWISVVFRNPLEQY 84
           FL ++  I WIS +F NP+E +
Sbjct: 24  FLTVEMVIVWISYLFINPVENF 45


>Z70783-11|CAA94860.2|  782|Caenorhabditis elegans Hypothetical
           protein ZK856.12 protein.
          Length = 782

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 159 HRTEISPGKEILVRLKNGTARRALVIRISGSKSI 260
           H +EI PG   + + K+G A R +++   G  +I
Sbjct: 137 HESEIVPGAMYIFKQKHGKAYRCIILSEDGDMNI 170


>AF047658-5|AAC04416.3|  434|Caenorhabditis elegans Hypothetical
           protein K03H6.5 protein.
          Length = 434

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -2

Query: 378 VNASTLKGTVFVSSYERKYNAKTCLTYISC 289
           V+   +  T+F++SY   + + TC+TYI+C
Sbjct: 161 VSVGIMVSTLFLTSYH--HFSHTCITYIAC 188


>Z70212-10|CAA94169.2|  319|Caenorhabditis elegans Hypothetical
           protein R04D3.10 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -1

Query: 301 LYILPLQKMLVFH*IDLLPDILITKARLAVPFFNLTNISFPGLI 170
           ++++ LQ M + + I LL   +I +   A+P   +  +S PG++
Sbjct: 10  IFMIILQTMCMLYNIVLLTATIINRRNAALPLAYIVLMSIPGIL 53


>Z50177-8|CAA90548.2|  319|Caenorhabditis elegans Hypothetical
           protein R04D3.10 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -1

Query: 301 LYILPLQKMLVFH*IDLLPDILITKARLAVPFFNLTNISFPGLI 170
           ++++ LQ M + + I LL   +I +   A+P   +  +S PG++
Sbjct: 10  IFMIILQTMCMLYNIVLLTATIINRRNAALPLAYIVLMSIPGIL 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,466,532
Number of Sequences: 27780
Number of extensions: 204306
Number of successful extensions: 695
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)