Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0591
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   2.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.3  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   5.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   5.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   5.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   5.3  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 262 SGIPTSSGEAGYISKTCFGVVFAF 333
           S  PT S     IS+  F +VFAF
Sbjct: 406 SKFPTRSKRIDVISRIFFPIVFAF 429


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 262 SGIPTSSGEAGYISKTCFGVVFAF 333
           S  PT S     IS+  F +VFAF
Sbjct: 406 SKFPTRSKRIDVISRIFFPIVFAF 429


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 227 FSYKDIREQIYLVEYQHLLE 286
           F + D R   YLV  Q LLE
Sbjct: 121 FHHDDARPHTYLVTRQKLLE 140


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 265 H*IDLLPDILITKARLAVPFFNLTNISFPGLIS 167
           H  D+   IL TK       F +TN S PG++S
Sbjct: 158 HGTDIEMRILKTKNECDHVQFLITNTSGPGVVS 190


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 326 LRSYELTNTVPFNVDALTN 382
           L+ YE+ + VPFN   +T+
Sbjct: 308 LKYYEVGSNVPFNFKFITD 326


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 265 H*IDLLPDILITKARLAVPFFNLTNISFPGLIS 167
           H  D+   IL TK       F +TN S PG++S
Sbjct: 158 HGTDIEMRILKTKNECDHVQFLITNTSGPGVVS 190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,990
Number of Sequences: 438
Number of extensions: 2415
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)