Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0590
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.3  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 6/35 (17%)
 Frame = +1

Query: 265 ITEINVRFLLYTYTYL-----IYVHNP-GKDIFIF 351
           +T +++RF LYT  ++     +Y H+  G++ FI+
Sbjct: 18  VTPVSLRFKLYTIVHIFIIIALYAHSSYGRENFIY 52


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +3

Query: 330 WKRHFYIYHTNIFPWRDSNPRPPC 401
           W+   ++   N  PW +    PPC
Sbjct: 307 WQNTDFVVCFNAKPWSNYCVEPPC 330


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 410 HVTYHYTRRPFVKWPLKF*NG 472
           H+   Y+R P+  WP    +G
Sbjct: 152 HLGSVYSRHPYESWPFNTMSG 172


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/22 (22%), Positives = 14/22 (63%)
 Frame = +2

Query: 431 RRPFVKWPLKF*NGIVVVCVIY 496
           +R +++W +KF   + ++ V +
Sbjct: 49  KRTYIEWGVKFLKVVTIITVFF 70


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/22 (22%), Positives = 14/22 (63%)
 Frame = +2

Query: 431 RRPFVKWPLKF*NGIVVVCVIY 496
           +R +++W +KF   + ++ V +
Sbjct: 49  KRTYIEWGVKFLKVVTIITVFF 70


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 362 ICMINIKMSFPGLWTYIKYVYVYNKNLTFISVIWYL 255
           +C I  K+      T   Y+ + NKN T++ +  YL
Sbjct: 1   MCQIKNKLLLLDSSTQPNYLILSNKNNTYLVLNKYL 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,122
Number of Sequences: 336
Number of extensions: 3636
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)