Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0590
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.     31   1.9  
DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge spli...    31   1.9  
AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge prot...    31   1.9  
AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA...    31   1.9  
AY508412-1|AAS91579.1|  452|Drosophila melanogaster mitochondria...    29   7.7  
AY060616-1|AAL28164.1|  452|Drosophila melanogaster GH04071p pro...    29   7.7  
AE014297-1076|AAF54482.2|  452|Drosophila melanogaster CG3910-PA...    29   7.7  

>U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.
          Length = 829

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 321 P*PWKRHFYIYHTNIFPWRDSNPRPPCIVTMSLTTTPDG 437
           P P   H + +H   +P+  + P PP +VT S +T+P G
Sbjct: 128 PHPHAPHHHHHHHPPYPYPPAGPHPPAMVTSS-STSPTG 165


>DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge splice
           variant protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 321 P*PWKRHFYIYHTNIFPWRDSNPRPPCIVTMSLTTTPDG 437
           P P   H + +H   +P+  + P PP +VT S +T+P G
Sbjct: 128 PHPHAPHHHHHHHPPYPYPPAGPHPPAMVTSS-STSPTG 165


>AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge
           protein.
          Length = 826

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 321 P*PWKRHFYIYHTNIFPWRDSNPRPPCIVTMSLTTTPDG 437
           P P   H + +H   +P+  + P PP +VT S +T+P G
Sbjct: 128 PHPHAPHHHHHHHPPYPYPPAGPHPPAMVTSS-STSPTG 165


>AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA
           protein.
          Length = 826

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 321 P*PWKRHFYIYHTNIFPWRDSNPRPPCIVTMSLTTTPDG 437
           P P   H + +H   +P+  + P PP +VT S +T+P G
Sbjct: 128 PHPHAPHHHHHHHPPYPYPPAGPHPPAMVTSS-STSPTG 165


>AY508412-1|AAS91579.1|  452|Drosophila melanogaster mitochondrial
           transcription factorB2 protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 386 VRIPPRENICMINIKMSFPGLWTYIKYVYVYNKN 285
           V+  PR N+  +      P LW +IK  YV  +N
Sbjct: 271 VKFTPRRNLHELCQSQDLPALWFFIKQNYVSRRN 304


>AY060616-1|AAL28164.1|  452|Drosophila melanogaster GH04071p
           protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 386 VRIPPRENICMINIKMSFPGLWTYIKYVYVYNKN 285
           V+  PR N+  +      P LW +IK  YV  +N
Sbjct: 271 VKFTPRRNLHELCQSQDLPALWFFIKQNYVSRRN 304


>AE014297-1076|AAF54482.2|  452|Drosophila melanogaster CG3910-PA
           protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 386 VRIPPRENICMINIKMSFPGLWTYIKYVYVYNKN 285
           V+  PR N+  +      P LW +IK  YV  +N
Sbjct: 271 VKFTPRRNLHELCQSQDLPALWFFIKQNYVSRRN 304


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,660,982
Number of Sequences: 53049
Number of extensions: 555392
Number of successful extensions: 1043
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)