Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0590
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016670-8|AAB66101.1|  783|Caenorhabditis elegans Hypothetical ...    30   1.3  
Z71265-5|CAA95836.1|  481|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>AF016670-8|AAB66101.1|  783|Caenorhabditis elegans Hypothetical
           protein K02F6.1 protein.
          Length = 783

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 317 YIKYVYVYNKNLTFISVIWYLHTSSLR 237
           Y +YVYV+N+N   +   W  H+  +R
Sbjct: 427 YTEYVYVWNRNNNLLGTSWMRHSPQMR 453


>Z71265-5|CAA95836.1|  481|Caenorhabditis elegans Hypothetical
           protein M05B5.6 protein.
          Length = 481

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/41 (21%), Positives = 23/41 (56%)
 Frame = -1

Query: 193 YLLFIIYYKASKSYLSRN*QSCLILYTCYNIFIYRTNIFYI 71
           + +F++     K+ ++++  +  I+  C+NIF Y   + Y+
Sbjct: 129 FFMFLVLKGTIKARITKSVSTWFIVAFCFNIFTYMATLAYV 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,679,852
Number of Sequences: 27780
Number of extensions: 307984
Number of successful extensions: 619
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)