Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0589
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 5e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 5e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 181 5e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 181 5e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 5e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 5e-19
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 77 9e-15
SB_54| Best HMM Match : Actin (HMM E-Value=0) 72 4e-13
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 71 6e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 5e-08
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 55 5e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 49 4e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.002
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.11
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.58
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_9336| Best HMM Match : Taeniidae_ag (HMM E-Value=0.9) 29 4.1
SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 28 5.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_15108| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_26535| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_11892| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 181 bits (440), Expect = 5e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 95.1 bits (226), Expect = 4e-20
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 81.0 bits (191), Expect = 7e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYA
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 181 bits (440), Expect = 5e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 106
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 107 EAPLNPKANREKMTQIMFETFN 128
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
Score = 81.0 bits (191), Expect = 7e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYA
Sbjct: 132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 170
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 181 bits (440), Expect = 5e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 106
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 107 EAPLNPKANREKMTQIMFETFN 128
Score = 93.5 bits (222), Expect = 1e-19
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
Score = 81.0 bits (191), Expect = 7e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYA
Sbjct: 132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 170
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 181 bits (440), Expect = 5e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 81.0 bits (191), Expect = 7e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYA
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 181 bits (440), Expect = 5e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 95.1 bits (226), Expect = 4e-20
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/41 (90%), Positives = 39/41 (95%), Gaps = 2/41 (4%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 627
MYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 388
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 81.0 bits (191), Expect = 7e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYA
Sbjct: 95 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 133
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 91.5 bits (217), Expect = 5e-19
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +2
Query: 239 SGRDGRMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YHELRVAPE 415
S + G + KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF ++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 416 EHPVLLTEAPLNPKANREKMTQIMFETF 499
VLLTE PLNP NREKM ++MFE +
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENY 131
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = +1
Query: 493 NIQHAPMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
N Q +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+A
Sbjct: 130 NYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFA 174
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 135 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYA
Sbjct: 11 VYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYA 49
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 624
MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY
Sbjct: 2177 MYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGY 2214
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +2
Query: 368 KIWHHTFYHELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 502
K+W H F +LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFN 2173
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 71.3 bits (167), Expect = 6e-13
Identities = 29/39 (74%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A
Sbjct: 158 LFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFA 196
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 416 EHPVLLTEAPLNPKANREKMTQIMFETFN 502
+HPVLLTEAPLNP+ NREK ++ FETFN
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFN 154
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = +2
Query: 269 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLL 433
D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 283 DFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 562 TGIVLDSGDGVSHTVPI 612
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 54.8 bits (126), Expect = 5e-08
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = +2
Query: 326 PIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 502
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYN 61
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +1
Query: 514 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 624
++ +VL+ +A+GR+ G+V+DSG + VP+++GY
Sbjct: 66 FLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGY 102
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 111 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLI 740
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 526 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 624
Q LSLYASG T G+ L SG + IYEG+
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGH 799
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 239 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 123
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 8/47 (17%)
Frame = +1
Query: 508 PMYVAIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGY 624
P Y A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY
Sbjct: 37 PSY-ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGY 82
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = +2
Query: 251 GRMGQKDS---YVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAP-- 412
GR G+ DS VG++ S I L+ P + +VT+++ E++ H F H P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 413 EEHPVLLTEAPLNPKANRE 469
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 275 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYHE 397
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 129 EVAALVVDNGSGMCKAGFAGDDAPRAV 209
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 31.1 bits (67), Expect = 0.77
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 122 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCS 3
A L L+KL CRC K +R + + + IP C C+
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCT 1335
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 110 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPC 6
L++L C C+K + KR + + Q+P C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQC 654
>SB_9336| Best HMM Match : Taeniidae_ag (HMM E-Value=0.9)
Length = 219
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 618 LVDGHGVGDTVAGVQHDT-GGTTGRVQREHGLDGDVHGGVLNVSNMIWVIFSLLALGLR 445
++ HG D + +D GG G + G+DGD G + V ++ ++ ++ L +R
Sbjct: 1 MIFSHGESDGIGYGDNDVDGGVDGYNDGDGGVDGDNDGATVMVMVVVVIVVMVVVLMVR 59
>SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
Length = 694
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -2
Query: 596 ETPSPESSTIPVVRPDAYSESTAWMATYMGAC*MFRT*SGSSSLC 462
ETP+P + P PDA TAW+ T FRT S S C
Sbjct: 169 ETPTPALESAPAAMPDA--TDTAWV-TAKARLYFFRTCRPSPSRC 210
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_15108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 442 SPQPQGQQREDDPDHVRNIQHAPMYVAIQAVL-SLYASGRTTGIV 573
+P+ G+ DP V ++HA +Y+ + L + +A GR + IV
Sbjct: 49 NPRINGEDNNQDPRPVLRLRHAQVYLGVLGPLGTRHAHGRISFIV 93
>SB_26535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 442 SPQPQGQQREDDPDHVRNIQHAPMYVAIQAVL-SLYASGRTTGIV 573
+P+ G+ DP V ++HA +Y+ + L + +A GR + IV
Sbjct: 49 NPRINGEDNNQDPRPVIRLRHAQVYLGVLGPLGTRHAHGRISFIV 93
>SB_11892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 486 CSKHSTRPHVRRHPSRALAVRVRSYHRYRAGLRRR 590
CS HS P + HP + +++R YH L RR
Sbjct: 1 CSLHSIGP-IPLHPKTSTRIQMRLYHAVGRNLTRR 34
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 229 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 119
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,962,213
Number of Sequences: 59808
Number of extensions: 550553
Number of successful extensions: 1844
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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