Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0589
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 181 4e-46
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 181 4e-46
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 181 4e-46
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 181 4e-46
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 181 4e-46
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 181 4e-46
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 181 4e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 181 4e-46
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 181 4e-46
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 181 4e-46
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 179 1e-45
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 111 3e-25
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 100 7e-22
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 100 7e-22
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 100 2e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 100 2e-21
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 95 5e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 87 7e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.010
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.010
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 31 0.51
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 2.7
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 3.6
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.3
Z81491-5|CAB04021.1| 225|Caenorhabditis elegans Hypothetical pr... 27 8.3
AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical... 27 8.3
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 8.3
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.3
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.3
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.3
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 181 bits (440), Expect = 4e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 7e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 181 bits (440), Expect = 4e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 81.8 bits (193), Expect = 4e-16
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYA
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 181 bits (440), Expect = 4e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 7e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 181 bits (440), Expect = 4e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 7e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 181 bits (440), Expect = 4e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 7e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 181 bits (440), Expect = 4e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 97.9 bits (233), Expect = 5e-21
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 81.8 bits (193), Expect = 4e-16
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYA
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 181 bits (440), Expect = 4e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 7e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 181 bits (440), Expect = 4e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 4 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 63
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 64 EAPLNPKANREKMTQIMFETFN 85
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 89 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 127
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 181 bits (440), Expect = 4e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 34 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 93
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 94 EAPLNPKANREKMTQIMFETFN 115
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 119 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 157
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 171 KAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMV 32
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 181 bits (440), Expect = 4e-46
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 7e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 179 bits (436), Expect = 1e-45
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY+ELR+APEEHPVLLT
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLT 106
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPK+NREKMTQIMFETFN
Sbjct: 107 EAPLNPKSNREKMTQIMFETFN 128
Score = 94.3 bits (224), Expect = 6e-20
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYA
Sbjct: 132 MYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYA 170
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 111 bits (268), Expect = 3e-25
Identities = 46/79 (58%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YHELRVAPEEHPVLLTEAP 445
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F +L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 446 LNPKANREKMTQIMFETFN 502
LNP NRE+ +I FETFN
Sbjct: 114 LNPLKNRERSAEIFFETFN 132
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A
Sbjct: 136 LYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFA 174
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 251
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVM 47
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 100 bits (240), Expect = 7e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 87.8 bits (208), Expect = 6e-18
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 373
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 100 bits (240), Expect = 7e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 87.8 bits (208), Expect = 6e-18
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 373
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 87.8 bits (208), Expect = 6e-18
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 373
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 364
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 94.7 bits (225), Expect = 5e-20
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +2
Query: 245 RDGRMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHE-LRVAPEEH 421
R G + KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 422 PVLLTEAPLNPKANREKMTQIMFETF 499
+LLTE PLNP +NREKM Q+MFE +
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQY 131
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/39 (66%), Positives = 34/39 (87%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
+YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+A
Sbjct: 136 IYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFA 174
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 87.4 bits (207), Expect = 7e-18
Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLTEAP 445
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 446 LNPKANREKMTQIMFETFN 502
LN NRE +IMFE+FN
Sbjct: 124 LNTPENREYTAEIMFESFN 142
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 8/46 (17%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGY 624
+Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY
Sbjct: 146 LYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGY 191
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 224
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = +2
Query: 329 IEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 499
++ G++ +W+ EKI H++ + L P EHPVL +E+ N +A REK+T+IMFE F
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKF 150
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +1
Query: 514 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
Y++ VLS +A GRT G+++DSG + VP+++GYA
Sbjct: 156 YLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYA 193
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 224
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 437 EAPLNPKANREKMTQIMFETF 499
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 437 EAPLNPKANREKMTQIMFETF 499
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 526 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 624
Q L LYA TTG+V+D G+ V + VP+ +GY
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGY 341
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 593 TPSPESSTIPVVRPDAYSESTAWMATYM 510
TP P SST+PVV P ++ T +Y+
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYL 892
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 627 CVSLVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGG 505
C + GH G G H GG G HG G HGG
Sbjct: 169 CEAHGGGHHGGGGGGGSHHHGGGGGGGGHHHHGGGGHYHGG 209
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/73 (28%), Positives = 28/73 (38%)
Frame = -2
Query: 422 GVPRGRHAAHGRRYDAKSSPCHPS**RFRVRWGI*GSGYLFCSVPHLLHKSPSVPYDHHA 243
GV G H +HG + A + H V G G+GY H H + ++HH
Sbjct: 584 GVHHGHHESHGHGHHAPAHHGHHG--EHGVHHGHHGAGYGAHHGHHGAHHHHAPHHEHHE 641
Query: 242 LMAGPSHDRGEHG 204
H G HG
Sbjct: 642 HHG--DHHHGSHG 652
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 171 KAGFAGDDAPRAVFPSIVGRPRHQG 245
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z81491-5|CAB04021.1| 225|Caenorhabditis elegans Hypothetical
protein D1086.5 protein.
Length = 225
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 248 DGRMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTN 352
DGR+ KD GD+ +RGI+T K +E +N
Sbjct: 186 DGRLRYKDRVRGDDNSMQRGIIT-KEDVERDFGSN 219
>AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical
protein Y59A8B.26 protein.
Length = 258
Score = 27.5 bits (58), Expect = 8.3
Identities = 24/66 (36%), Positives = 29/66 (43%)
Frame = -1
Query: 600 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHGGVLNVSNMIWVIFSLLALGLRGASVSRTG 421
VGD G+ TGG TG + GL G V GG+ N L+ L GA+ TG
Sbjct: 96 VGDLTGGLGGATGGATGAL---GGLTGTV-GGLTNALGGATGGLGGLSGILGGATGGATG 151
Query: 420 CSSGAT 403
G T
Sbjct: 152 ALGGLT 157
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 196 ASSPAKPALHIPEPLSTTNAATSS 125
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 196 ASSPAKPALHIPEPLSTTNAATSS 125
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 196 ASSPAKPALHIPEPLSTTNAATSS 125
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 196 ASSPAKPALHIPEPLSTTNAATSS 125
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,196,019
Number of Sequences: 27780
Number of extensions: 375869
Number of successful extensions: 1491
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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