Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0589
(627 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 178 3e-45
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 178 3e-45
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 177 4e-45
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 177 4e-45
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 177 5e-45
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 177 5e-45
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 175 3e-44
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 175 3e-44
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 175 3e-44
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 159 2e-39
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 151 5e-37
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 144 3e-35
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 98 5e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 85 4e-17
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 75 3e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 67 8e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 51 5e-07
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 48 4e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 2e-04
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 34 0.067
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 34 0.067
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 31 0.63
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 31 0.63
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 31 0.63
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 31 0.83
At4g10350.1 68417.m01700 no apical meristem (NAM) family protein... 30 1.4
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 29 2.5
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 2.5
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.5
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.5
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 29 3.3
At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family... 28 5.8
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.8
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 5.8
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.7
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa... 27 7.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 178 bits (433), Expect = 3e-45
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 83.0 bits (196), Expect = 1e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 178 bits (433), Expect = 3e-45
Identities = 79/82 (96%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 83.0 bits (196), Expect = 1e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 177 bits (432), Expect = 4e-45
Identities = 79/82 (96%), Positives = 81/82 (98%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 83.0 bits (196), Expect = 1e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 177 bits (432), Expect = 4e-45
Identities = 79/82 (96%), Positives = 81/82 (98%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFY+ELRVAPEEHPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 83.0 bits (196), Expect = 1e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 177 bits (431), Expect = 5e-45
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFY+ELRVAPEEHP+LLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 83.4 bits (197), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
Frame = +1
Query: 502 HAP-MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
+AP MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA
Sbjct: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 177 bits (431), Expect = 5e-45
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
MGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFY+ELRVAPEEHP+LLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 83.4 bits (197), Expect = 1e-16
Identities = 41/43 (95%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
Frame = +1
Query: 502 HAP-MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
+AP MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA
Sbjct: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 175 bits (425), Expect = 3e-44
Identities = 76/82 (92%), Positives = 81/82 (98%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
M QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFY+ELR+APEEHPVLLT
Sbjct: 49 MNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFS 172
Score = 76.6 bits (180), Expect = 1e-14
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMV 47
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 175 bits (425), Expect = 3e-44
Identities = 76/82 (92%), Positives = 81/82 (98%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
M QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFY+ELR+APEEHPVLLT
Sbjct: 49 MNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFS 172
Score = 76.6 bits (180), Expect = 1e-14
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMV 47
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 175 bits (425), Expect = 3e-44
Identities = 76/82 (92%), Positives = 81/82 (98%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
M QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFY+ELR+APEEHPVLLT
Sbjct: 49 MNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFS 172
Score = 76.6 bits (180), Expect = 1e-14
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMV 47
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 159 bits (385), Expect = 2e-39
Identities = 66/81 (81%), Positives = 78/81 (96%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
M +KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFY+ELR+ PEEHP+LLT
Sbjct: 50 MDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLT 109
Query: 437 EAPLNPKANREKMTQIMFETF 499
EAPLNPK NREKMTQIMFE+F
Sbjct: 110 EAPLNPKVNREKMTQIMFESF 130
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRR 269
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMV D +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYA
Sbjct: 135 MYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYA 173
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 151 bits (365), Expect = 5e-37
Identities = 64/81 (79%), Positives = 75/81 (92%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLT 436
M + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY ELRVAPEEHPVLLT
Sbjct: 4 MNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLT 63
Query: 437 EAPLNPKANREKMTQIMFETF 499
EAPLNPKA+REKMTQIMFETF
Sbjct: 64 EAPLNPKADREKMTQIMFETF 84
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MY+ +QA LSL+ASGRTTG VLDSGDGVS+ VPIYEG A
Sbjct: 89 MYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSA 127
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 144 bits (350), Expect = 3e-35
Identities = 65/86 (75%), Positives = 74/86 (86%)
Frame = +2
Query: 245 RDGRMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHP 424
RDG + +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFY+ELRV PEEHP
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 425 VLLTEAPLNPKANREKMTQIMFETFN 502
VLLTEAP NPKANREKMTQIMFE+F+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFD 119
Score = 67.7 bits (158), Expect = 6e-12
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
MYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYA
Sbjct: 123 MYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYA 161
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 236
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 97.9 bits (233), Expect = 5e-21
Identities = 40/79 (50%), Positives = 53/79 (67%)
Frame = +2
Query: 266 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLTEAP 445
KD VG+ R L + YP+ +GIV NWDDME +W H FY+EL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 446 LNPKANREKMTQIMFETFN 502
LNP NREKM + MFE +N
Sbjct: 111 LNPSKNREKMIETMFEKYN 129
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/41 (58%), Positives = 34/41 (82%)
Frame = +1
Query: 505 APMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 627
A +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+
Sbjct: 131 AGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYS 171
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 85.0 bits (201), Expect = 4e-17
Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = +2
Query: 269 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLTE 439
D Y+GDEA +K R T L YPIEHG V +WD ME+ W ++ LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 440 APLNPKANREKMTQIMFETFN 502
+PL P +RE +I+FETFN
Sbjct: 127 SPLTPPESREYTGEILFETFN 147
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Frame = +1
Query: 442 SPQPQGQQREDDPDHVRNIQHAP-MYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHT 603
SP + RE + + + P +Y+A+ +VL+L A T TG+V+D GDG +H
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHV 186
Query: 604 VPIYEGY 624
VP+ EGY
Sbjct: 187 VPVAEGY 193
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 138 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 224
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +2
Query: 275 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLTEAPLN 451
YVG +A S +R + + PI+ GIV++WD ++ IW H F L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 452 PKANREKMTQIMFETF 499
+ REK ++MFE +
Sbjct: 136 TQQQREKAAELMFEKY 151
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 227
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 460 QQREDDPDHVRNIQHAP-MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 624
QQRE + + P +++A VL+ +A+GR T +V+D G G + P+++GY
Sbjct: 138 QQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGY 193
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 67.3 bits (157), Expect = 8e-12
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +2
Query: 248 DGRMGQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHP 424
D G++ Y G +A + +R + + P + GIVT+WD ++ +W H F + L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 425 VLLTEAPLNPKANREK 472
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 227
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 326 PIEHGIVTNWDDMEKIWHHTFYHELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 502
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 514 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 621
Y + QAVLSLYA GR +G +D G G P+ EG
Sbjct: 121 YASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEG 156
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 138 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 230
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +2
Query: 317 LKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 496
++ PI+ G + N D +IW H F L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 497 F 499
F
Sbjct: 121 F 121
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 326 PIEHGIVTNWDDMEKIWHHTFYH-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 499
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETY 143
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 34.3 bits (75), Expect = 0.067
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 502 HAPMYVAI-QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 621
+ P A+ QAVL+LYA+ RT+GIV++ G V +PI G
Sbjct: 230 NVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 34.3 bits (75), Expect = 0.067
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 502 HAPMYVAI-QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 621
+ P A+ QAVL+LYA+ RT+GIV++ G V +PI G
Sbjct: 230 NVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 498 STRPHVRRHPSRALAVRVRSYHRYRAGLRRR 590
S P RR PSR+L+ R RSY R R+ +RRR
Sbjct: 115 SRSPRRRRSPSRSLS-RSRSYSRSRSPVRRR 144
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 498 STRPHVRRHPSRALAVRVRSYHRYRAGLRRR 590
S P RR PSR+L+ R RSY R R+ +RRR
Sbjct: 126 SRSPRRRRSPSRSLS-RSRSYSRSRSPVRRR 155
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 498 STRPHVRRHPSRALAVRVRSYHRYRAGLRRR 590
S P RR PSR+L+ R RSY R R+ +RRR
Sbjct: 156 SRSPRRRRSPSRSLS-RSRSYSRSRSPVRRR 185
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.7 bits (66), Expect = 0.83
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -3
Query: 376 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVLLSHTTITP*WRGLPTIEGNTA 203
P L V+ ++ D + + + + YI + T RGL +G T+
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKPTRGLIVYQGATS 308
Query: 202 RGASSPAKPALHIPEPLSTTNAATSS 125
+SSPA+P + +P +ST + TS+
Sbjct: 309 --SSSPAEPLMPVPNDMSTAHRFTSN 332
>At4g10350.1 68417.m01700 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
nap gene, Arabidopsis thaliana, gb:AJ222713
Length = 341
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 290 PHLLHKSPSVPYDHHALMAGPSHDRGEHGARSIISCETGL 171
P + HK PS+ +D+ + +A S G + +CE GL
Sbjct: 227 PPIFHKPPSLGFDYSSGLARDSESAASEGLQYQQACEPGL 266
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVW 260
E++ A + + G G+C A +D + V I GR +GV+ W
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVVSEW 676
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 256 TTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATS 128
TT+TP LP + T +SP P ++ P P TT+ TS
Sbjct: 29 TTVTPPPTALPPVTAETPSPIASPPVP-VNEPTPAPTTSPTTS 70
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 284 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLTEAPLNPKAN 463
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 464 REK 472
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 284 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYHELRVAPEEHPVLLTEAPLNPKAN 463
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 464 REK 472
REK
Sbjct: 225 REK 227
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 215 LDRGKAPPSGRDGRMGQKDSYVGDEAQSKRGILTLK 322
L+RG+ S R GR +S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family
protein identical to hydroxyproline-rich glycoprotein
[Arabidopsis thaliana] gi|9293881|dbj|BAB01784
Length = 532
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 626 AYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMGAC 501
AYPS TV+ SP P + P +Y S Y G C
Sbjct: 462 AYPSPPTTVYSNRSPPYPYSPEIIPGSYQGSPIGYPAYNGYC 503
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 372 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 283
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 364 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 257
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 238 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 116
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
family protein similar to C-terminal zinc-finger
[Glycine max] GI:558543; contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 486
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 296 SVPHLLHKSPSVPYDHHALMAGPSHDRGEHGA 201
+VPHL S PYD++++ GP +H +
Sbjct: 41 TVPHLEAHSLQEPYDNNSMFYGPPQYHHQHAS 72
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,567,578
Number of Sequences: 28952
Number of extensions: 359768
Number of successful extensions: 1155
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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