Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0588
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   5.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   7.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   7.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 331  TTEPTASHSTTPAIVDNK 384
            T  P   HSTT ++VD K
Sbjct: 1803 TVVPPPQHSTTQSLVDPK 1820


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 286 HETDVKINTIPPD 324
           H+TD+ I T+P +
Sbjct: 364 HKTDINITTVPSE 376


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/39 (25%), Positives = 14/39 (35%)
 Frame = +1

Query: 376 DNKVPKKRKKEKSIKDGGVNEKPANGEMKKDPSLVSANN 492
           DNK+P  +   +     GV          K  +   ANN
Sbjct: 291 DNKLPNTKNVRRKTNPAGVTTTTKGKVRAKTQNATPANN 329


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/39 (25%), Positives = 14/39 (35%)
 Frame = +1

Query: 376 DNKVPKKRKKEKSIKDGGVNEKPANGEMKKDPSLVSANN 492
           DNK+P  +   +     GV          K  +   ANN
Sbjct: 291 DNKLPNTKNVRRKTNPAGVTTTTKGKVRAKTQNATPANN 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,198
Number of Sequences: 336
Number of extensions: 2599
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)