Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0588
(590 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 35 0.056
07_03_0046 + 12781335-12782073,12782254-12783014 32 0.30
10_05_0103 - 9186758-9187345,9187395-9187951,9188265-9188376 31 0.69
12_01_0395 - 3117315-3118117,3118354-3118478,3118558-3118770,311... 30 1.6
08_02_0078 + 12001523-12001634,12002169-12002500,12002624-120027... 29 2.1
11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371 29 2.8
04_03_0166 + 12175952-12176045,12176080-12176762 29 2.8
02_03_0057 + 14528676-14528951,14529658-14529702 29 3.7
11_06_0610 - 25449085-25453284 28 4.8
04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015... 28 4.8
01_06_0930 + 33134385-33138257 28 4.8
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 28 4.8
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 28 4.8
01_05_0191 - 19091991-19093223 28 4.8
11_06_0313 + 22306497-22308938 28 6.4
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 28 6.4
04_01_0312 + 4206400-4206627,4206661-4207269,4207425-4207902,420... 28 6.4
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 28 6.4
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 28 6.4
12_02_0879 + 23960084-23961551,23961796-23962184 27 8.5
11_01_0029 + 226459-226973,227053-227424,227533-227688,229513-22... 27 8.5
05_07_0121 + 27831499-27832317 27 8.5
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 34.7 bits (76), Expect = 0.056
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 247 KHDAVLSNWESPPHETDVKINTIPPDPLTTEPTASHSTTPAIVDNKVPKKRKK 405
KHD +LSN E P H DV I DP T E + + A +D P++RK+
Sbjct: 504 KHDKLLSNKEIPAHLRDVPEYLI--DPTTKEASNVVKLSRAAMDIDKPRRRKR 554
>07_03_0046 + 12781335-12782073,12782254-12783014
Length = 499
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 274 ESPPHETDVKINTIPPDPLTTEPTASHSTTPAIVDNKVPKKRKKE 408
+S +T+ ++ I +PLT EP + ST +++D KVP++ E
Sbjct: 174 QSDEPQTEASVSKIE-EPLTIEPLSEPSTFASLIDEKVPEQPSVE 217
>10_05_0103 - 9186758-9187345,9187395-9187951,9188265-9188376
Length = 418
Score = 31.1 bits (67), Expect = 0.69
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 223 KTI*RAIGKHDAVLSNWESPPHETDV-KINTIPPDPLTTEPTASHSTTPAIVDNKVPKKR 399
KTI I ++ + ++ P E V KI +PLT EP A ST + VD KVP++
Sbjct: 92 KTILDRILENTSFMTQSNEPQSEASVSKIE----EPLTIEPLAEPSTFASSVDEKVPEQP 147
Query: 400 KKE 408
E
Sbjct: 148 SVE 150
>12_01_0395 -
3117315-3118117,3118354-3118478,3118558-3118770,
3118850-3120076,3120537-3120622,3121197-3121223
Length = 826
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 391 KKRKKEKSIKDGGVNEKPANGEMK-KDPSLVSANNIKPGDATRRY-HGNPVLRRKLVILD 564
+ R++ + DG + + K K ++++++P DA + + NP+ RRKL++LD
Sbjct: 191 ENRRESSMLLDGACSGSLSKDSSKEKIDREANSSHMEPSDAVKNFCKDNPMKRRKLMLLD 250
>08_02_0078 +
12001523-12001634,12002169-12002500,12002624-12002791,
12002904-12003311
Length = 339
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 322 DPLTTEPTASHSTTPAIVDNKVPKKRKKE 408
+PLT EP A ST + +D KVP++ E
Sbjct: 47 EPLTIEPLAEPSTYASSIDEKVPEQPSVE 75
>11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371
Length = 680
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 322 DPLTTEPTASHSTTPAIVDNKVPKK 396
+PLT EP + ST+ + +D KVP++
Sbjct: 497 EPLTIEPLSKPSTSASSIDEKVPEQ 521
>04_03_0166 + 12175952-12176045,12176080-12176762
Length = 258
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 322 DPLTTEPTASHSTTPAIVDNKVPKKRKKE 408
+PLT +P A ST+ + +D KVP++ E
Sbjct: 208 EPLTMKPLAQPSTSASSIDEKVPEQPSVE 236
>02_03_0057 + 14528676-14528951,14529658-14529702
Length = 106
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 322 DPLTTEPTASHSTTPAIVDNKVPKKRKKE 408
+PLT EP + ST+ + +D K+P++ E
Sbjct: 18 EPLTIEPHSEPSTSASSIDEKIPEQPSVE 46
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 277 SPPHETDVKINTIPP-DPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANG 453
SPP + + + PP P + P+ +H T+P K P +E S + P +G
Sbjct: 769 SPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPP-PSEKSPPTPAEESSPPTPEKSPSPPSG 827
Query: 454 EMKKDPSLVSANNIKP 501
PS V +++ P
Sbjct: 828 HEGTPPSPVKSSSPPP 843
>04_03_0742 +
19200045-19200053,19200158-19200437,19201331-19201545,
19201705-19201792,19202277-19202842
Length = 385
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 391 KKRKKEKSIKDGGVNEKPANGEMKKDPSLVSANNI 495
KK +KEK + G + + + + +KDP+ ++A N+
Sbjct: 287 KKEEKEKEKEGGNADGEEKDKDKEKDPAAIAAANL 321
>01_06_0930 + 33134385-33138257
Length = 1290
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 393 LRYLVIYYCWCCRMTCGGFSS 331
LRYLVI CWC R + GG S
Sbjct: 1029 LRYLVIRSCWCLR-SFGGLRS 1048
>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 393 LRYLVIYYCWCCRMTCGGFSS 331
LRYLVI CWC R + GG S
Sbjct: 1211 LRYLVIRSCWCLR-SFGGLRS 1230
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 328 LTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDG--GVNEKPANGEMKKDPSLVSANNIK 498
L+ E +PA P+K++ E +KDG NE+ + DP L+S+N+ +
Sbjct: 381 LSAEQNTGAFESPAYTHETTPRKQQAEHLMKDGQRSSNEQSSGA---YDPRLISSNDAR 436
>01_05_0191 - 19091991-19093223
Length = 410
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 542 RSTGFPWYLLVASPGFILLALTSDGSFFISPFAGFSLTPPSL 417
R GF + A+ G L+ DG F ++PF G ++T P+L
Sbjct: 79 RFPGFGFAGYKATCGSRLVFPRDDGCFLVNPFTGATVTLPAL 120
>11_06_0313 + 22306497-22308938
Length = 813
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/85 (21%), Positives = 33/85 (38%)
Frame = +1
Query: 280 PPHETDVKINTIPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEM 459
P DV + + P P T + V+ V +KR + + ++DG P
Sbjct: 173 PKRVQDVPVLSTPSAPQVDSTV--FQTPASAVNESVTRKRGRPRRVQDGADTSAPPIQSK 230
Query: 460 KKDPSLVSANNIKPGDATRRYHGNP 534
+P L + + + + +R G P
Sbjct: 231 YNEPVLQTPSAVTLPEDGKRKRGRP 255
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 241 IGKHDAVLSNWESPPHETDVKINTIPPDPLTTEPT-ASHSTTPAIVDNKVPKKRKKEK 411
+GKHDA+ S P ETD+ + T T A + AIV V + ++++
Sbjct: 265 LGKHDAIASGSPLPDEETDIMNESSAETTSTPVATGAPRAAVAAIVPTNVFDEEEEDE 322
>04_01_0312 +
4206400-4206627,4206661-4207269,4207425-4207902,
4208006-4208297,4209278-4209569,4210013-4210465
Length = 783
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 322 DPLTTEPTASHSTTPAIVDNKVPKK 396
+PL EP A ST+ + +D KVP++
Sbjct: 216 EPLMIEPLAEPSTSASSIDEKVPEQ 240
>03_02_0999 -
13105030-13105434,13105716-13105850,13105933-13106133,
13106374-13106673,13106764-13106964,13107246-13107410,
13107484-13107663,13108171-13108212,13108327-13108404
Length = 568
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 334 TEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEMKK 465
TEP + TT D + KK+KK+KS + A+G KK
Sbjct: 467 TEPAPAEKTTKEDGDQEGEKKKKKKKSKESEESPAADADGGKKK 510
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 319 PDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEMKKDPSLVSA 486
P P P A +TT V K P + +KEK +++ + E KKD + +A
Sbjct: 5 PQP-EAAPAAVAATTEVAVAEKAPVEAEKEKKVEEETPAVEAEAKEEKKDEAAAAA 59
>12_02_0879 + 23960084-23961551,23961796-23962184
Length = 618
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 415 IKDGGVNEKPANGEMKKDPSLVSANN 492
+KDG V++KP E+KK P ++++N
Sbjct: 120 VKDGNVHDKPEFIEVKKPPIEMASDN 145
>11_01_0029 +
226459-226973,227053-227424,227533-227688,229513-229595,
229665-229728,230209-230596
Length = 525
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 274 ESPPHETDVKINTIPPDPLTTEPTASHSTT 363
+SPP T + PP P +T P AS S++
Sbjct: 7 QSPPSTTATTTTSPPPPPPSTPPPASSSSS 36
>05_07_0121 + 27831499-27832317
Length = 272
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/66 (28%), Positives = 24/66 (36%)
Frame = +1
Query: 325 PLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEMKKDPSLVSANNIKPG 504
PL E TPA P K K +K K G+ E P + D + A P
Sbjct: 193 PLPYELFGPKPPTPAPAPAPAPSKSKTKKHKKSAGIAEPPVADDASADDTTKKA--AAPA 250
Query: 505 DATRRY 522
A R+
Sbjct: 251 TAVSRW 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,297,586
Number of Sequences: 37544
Number of extensions: 268134
Number of successful extensions: 971
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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