Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0588
(590 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20) 36 0.025
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012) 34 0.076
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_35998| Best HMM Match : SURF6 (HMM E-Value=4.8) 32 0.40
SB_54792| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_38155| Best HMM Match : DUF414 (HMM E-Value=4.4) 30 1.6
SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16) 30 1.6
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0) 29 2.8
SB_12895| Best HMM Match : C1_3 (HMM E-Value=0.03) 29 2.8
SB_57202| Best HMM Match : DUF805 (HMM E-Value=4.9) 29 3.8
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 29 3.8
SB_45828| Best HMM Match : S-antigen (HMM E-Value=0.0095) 28 5.0
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 28 5.0
SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_11312| Best HMM Match : Ank (HMM E-Value=2.1e-18) 28 5.0
SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55) 28 5.0
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_6719| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_47094| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 27 8.7
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_31970| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84) 27 8.7
SB_15021| Best HMM Match : Zona_pellucida (HMM E-Value=0) 27 8.7
>SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20)
Length = 1423
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +1
Query: 307 NTIPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEMKKDPSLVSA 486
N +P T +P S +P V VP + K++S ++ + P ++K+ +
Sbjct: 266 NFVPRQQSTRQPMPKSSLSP-YVKEFVPLSKMKQESTEEQIKQKPPDTSHIRKEDANRKE 324
Query: 487 NNIKPGDATRRYH 525
NNI GD+ ++H
Sbjct: 325 NNISTGDSHGKFH 337
>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
Length = 1348
Score = 34.3 bits (75), Expect = 0.076
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +1
Query: 283 PHETDVKINTIPPDPLTTEPTA-SHSTTPAIVDNKVPKKRK--KEKSIKDGGVNEKPANG 453
P +T + I P P+ EP+A S P++ + P + + + + +GG +P +G
Sbjct: 322 PPKTRPSVYEIAPRPVPAEPSAFSDVQRPSVYEIAPPPRPRLPAREPVAEGGQEGRPISG 381
Query: 454 EMKKDPSLVSANNIKPGDATR 516
E + SL+ +P TR
Sbjct: 382 EGPRHGSLIKEEPPRPPQKTR 402
>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = +1
Query: 259 VLSNWESPPHETDVKINTIPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIK--DGGV 432
V +W PPH D+ + P +PT S K PKKR++ K K G
Sbjct: 2262 VTGHW--PPHGLDMDLPITDQIPANFDPTLS---------EKPPKKRRRRKEDKGEKGEK 2310
Query: 433 NEKPANGEMK-KDPSLVSANNI-KPGDATRRYHG 528
EKP G+ + + P + +PGD+ HG
Sbjct: 2311 PEKPPTGKKRGRKPKTAKLGSAGQPGDSGGTPHG 2344
>SB_35998| Best HMM Match : SURF6 (HMM E-Value=4.8)
Length = 279
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 ESPPHETDVKINTIPPD-PLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPAN 450
++ P E ++ D P T T + PA+ ++K PKK+K++ ++K+ V +K N
Sbjct: 62 DNKPQEVTQQVGDSKNDKPQETRSTVK-TVKPAVTEDK-PKKKKEKSAVKEDKVTKKGRN 119
Query: 451 GEMKKD 468
K D
Sbjct: 120 PVSKAD 125
>SB_54792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 578
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -3
Query: 369 CWCCRMTCGGFSS*RIWWYCIYFDISLVRWGLPVRQH 259
CW CG + R W C + +WGL +R++
Sbjct: 126 CWRTYRLCGKLETWRKWLRCFHLQSQRQQWGLRLREN 162
>SB_38155| Best HMM Match : DUF414 (HMM E-Value=4.4)
Length = 361
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +1
Query: 292 TDVKINTIPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEMKKDP 471
T +++T PP + +PT +T D KV +++KS+ + + E G + P
Sbjct: 284 TSSQVSTEPP--IKKDPTHHKRSTTLPKDLKVHTTAQEKKSVAEDTILEGSEEGSSESSP 341
Query: 472 SLVSA 486
S VS+
Sbjct: 342 SSVSS 346
>SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16)
Length = 411
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 292 TDVKINTIPPDPLT--TEPTASHSTTPAIVDNKVPKKRKKEK 411
T+V I P+P T EP +T P D + KK++K+K
Sbjct: 168 TEVNIIDNEPEPATISPEPIPEETTQPTTTDEEPKKKKRKQK 209
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +1
Query: 313 IPPDPLTTEPTAS-HSTTPAIVD--NKVPKKRKKEKSIKDGGVNEKPANGEMKKDPSLVS 483
+ P+ T T++ H A V + KK++ K+ + V+ +P + K +
Sbjct: 297 VTPEKTPTASTSNGHGIPSASVSLLGILEKKKESPKAPEVSSVSPRPRDEHTAKGEPKIV 356
Query: 484 ANNIKPGDATRRYHGNPVLRRKLVILDI 567
A+ KP RY L ++I D+
Sbjct: 357 ASERKPNVTMSRYSHFDFLANSIIITDV 384
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 253 DAVLSNWESPPHETDVKINTIPPDPLTTEPTASHSTTP 366
+ L+ +S H T T+PP TT PT + +T P
Sbjct: 5586 EEALAKMKSLQHNTTTTSTTLPPITTTTTPTTTPTTPP 5623
>SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = +1
Query: 205 KEN*NEKTI*RAIGKHDAVLSNWESPPHETDVKINTIPPDPLTTEPTASHSTTPAIVDNK 384
K + N++T + DA + + + T PP+ + T + TTP +
Sbjct: 320 KNDNNDETERMGDNEEDAAADDDDDEEKQGKHDDKTFPPNTASPSTTKTTPTTPRTTPSA 379
Query: 385 VPKKRKKEKSIKDGGVNEKP 444
K KKE K GG++ P
Sbjct: 380 SADK-KKESGKKHGGIDWNP 398
>SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0)
Length = 584
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 283 PHETDVKINTIPPDPLTTEPTASHS-TTPAIVDNKVPKK--RKKEKSIK 420
P E D +N IP P ++ P S + T P ++ K+P RK K K
Sbjct: 38 PTEDDDIMNHIPTSPTSSLPPNSPTETVPMVIPTKIPNSSPRKNSKEAK 86
>SB_12895| Best HMM Match : C1_3 (HMM E-Value=0.03)
Length = 1832
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 235 RAIGKHDAVLSNWESPPHETDVKINTIPPDPLTTEPTASHSTT---PAIVDNKVPKKRKK 405
RA D S+ + P T ++ PP ++ +P+ S S + P + DN +P + KK
Sbjct: 770 RAAAMADRPASSSSTIP--TSTALHRSPPAKVSPKPSRSASASLKLPPMADNSIPVELKK 827
Query: 406 EKSIKD 423
E++ D
Sbjct: 828 EENKTD 833
>SB_57202| Best HMM Match : DUF805 (HMM E-Value=4.9)
Length = 170
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 565 CPVLPTFFGVRGFRGIFSLHHPVL 494
C VL TFF + GF + HPV+
Sbjct: 7 CAVLRTFFAINGFFSFYGNIHPVI 30
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 313 IPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEMKKDPSLVSANN 492
+ P P+TT P + +P VP ++K+E S + A E KK P +A N
Sbjct: 783 VTPKPVTTRPVEAVRHSPRRDRGVVPPEKKRETSNSEKKKEVATAPTEKKKLP---TAPN 839
Query: 493 IKPGDA 510
K DA
Sbjct: 840 EKKKDA 845
>SB_45828| Best HMM Match : S-antigen (HMM E-Value=0.0095)
Length = 250
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = +1
Query: 313 IPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEMKKDPSLVSANN 492
+PP + PT S P +KVP + ++ P K P+ A+
Sbjct: 13 VPPTDASKVPTTDASKVPPTDASKVPPTDANASKVPTTDASKVPTTDASKVPPT--DASK 70
Query: 493 IKPGDATR 516
+ P DA++
Sbjct: 71 VPPTDASK 78
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 28.3 bits (60), Expect = 5.0
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Frame = +1
Query: 235 RAIGKHDAVLSNWESPPHETDVKINTIPPD----PLTTEPTASHS--TTPAIVDNKVPKK 396
+AI KHDA + E KI + + +P A HS T +I D K
Sbjct: 1738 KAIIKHDATTAELEKIDKLLRGKIEQLIKEHTKKKYDVKPNAEHSKDTNASIKDKKKLSA 1797
Query: 397 R--KKEKSIKDGGVNEKPANGEMKKDPSLVSANNIKPGDATRR 519
+ ++KD +G+ KK P S +NIK + +RR
Sbjct: 1798 KFVNVVSNLKDMTPLSNSTSGDSKKQPGNGSDDNIKHIEESRR 1840
>SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1660
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Frame = +1
Query: 292 TDVKINTIPPDPLTTEPTASHSTTPAIVDNKVP------KKRKKEKSIKDGGVNEKP--A 447
T +KI P D T + + TTP +N P + +E S + V+ P
Sbjct: 557 TGIKIKEEPEDHPTVIASTQNGTTPTAANNTPPVESGSTQSLSQESSTRINSVSGSPPME 616
Query: 448 NGEMKKDPSLVSANNIKPGDATR 516
+G ++ PS+ + + I D R
Sbjct: 617 SGHVQSSPSINTLSGIPDADNGR 639
>SB_11312| Best HMM Match : Ank (HMM E-Value=2.1e-18)
Length = 516
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 277 SPPHETDVKINTIPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDG 426
+P + D + T PP TT+ S S T + + PKK K K G
Sbjct: 451 TPTTDPDAPLTTFPP---TTQGRKSSSRTGSQAGKRTPKKMDKVKKASPG 497
>SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55)
Length = 910
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 352 HSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEMKKDP 471
+S T A +++K +KR KE +GG+ E P + +DP
Sbjct: 540 NSGTVAPINDKTSEKRPKEN---EGGLREMPGRRDESRDP 576
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 277 SPPHETDVKINTIPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKP-ANG 453
S ET+ NTI P+P+ + + + KK KK+K+ K EKP A+G
Sbjct: 49 SEKEETNAIPNTIVPEPVIVQEITPVTEAQVSSEPPATKKSKKQKNPK-----EKPTASG 103
Query: 454 EM 459
E+
Sbjct: 104 EL 105
>SB_6719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 289 ETDVKINTIPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIK 420
E ++ T+P T+ S + IV K+ KKRKK+K+ K
Sbjct: 366 EYRIRKGTLPSRVTNTDNYKSRLSINEIVSKKLKKKRKKKKNRK 409
>SB_47094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 274 ESPPHETDVKINTIPPDPLTTEPTASHSTT--PAIVDNKVPKKRK--KEKSIKDGGVNEK 441
E+PP + ++PP+P+ + S +T I +NK R+ K ++ N
Sbjct: 206 EAPPMKEGKTKKSVPPEPIKDRSSVSRQSTHGEVIRNNKAQSIRQGVKRNHVEASKNNRP 265
Query: 442 PANGEMKK 465
PA KK
Sbjct: 266 PAPERTKK 273
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = +1
Query: 313 IPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEMKKDPSLVSANN 492
+PP + P S P +KVP + D ++ P K P+ A+
Sbjct: 713 VPPTDASKVPPTDASKVPTTDASKVPPTDASKVPPTDANASKVPTTDASKVPPT--DASK 770
Query: 493 IKPGDATR 516
+ P DA++
Sbjct: 771 VPPTDASK 778
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +1
Query: 253 DAVLSNWES----PPHETDVKINTIPPDPLTTEPTASHSTTPA 369
DA S+ ES P T + +T+P +P TT+ T SH + PA
Sbjct: 1670 DATTSHHESLPAAEPLSTTDRSSTLP-EPSTTDATTSHESLPA 1711
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = +1
Query: 319 PDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANG-EMKKDPSLVSANNI 495
PDP+ + A+ + + DN + + SIK N + N DP L + NI
Sbjct: 521 PDPVNKDVIAASTNSSGEEDNDESESDSETASIKSAVSNYELTNDINENDDPDLANRVNI 580
Query: 496 KPGDATRRY---HGNPVLRRKLVILDIPFYHPS 585
D ++ +RR+ + DI Y+ S
Sbjct: 581 ANNDCKSQWDEPXXXXSMRRRSSMSDIYSYYVS 613
>SB_31970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +1
Query: 289 ETDVKINTIPPDPLTTEPTASHSTTPAIVDNKVPKKRKKEKSIKDGGVNEKPANGEMKKD 468
E +++ + DP+ T+ +T + VD + K KKEK G + KK
Sbjct: 129 EEKLRVESSRCDPMNTQGMQQSTTADSKVDVDINYKDKKEKKKSKGKKRKNVKKNSKKKH 188
Query: 469 PSLV 480
+++
Sbjct: 189 ITII 192
>SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84)
Length = 244
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +1
Query: 247 KHDAVLSNWESPPHETDV---KINTIPPDPLTTEPTASHSTTPAIVDNKVP 390
KHD V PP T V + +P TTEPT +T P + VP
Sbjct: 146 KHDLVQPT--EPPVTTPVPTTESTAVPTTAPTTEPTTVPTTIPTTIPTTVP 194
>SB_15021| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 751
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 289 ETDVKINTIPPDPLTT-EPTASHSTT 363
+TD+ T+PP P TT PT + +TT
Sbjct: 177 DTDIPPPTLPPPPTTTPPPTTTQATT 202
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,611,743
Number of Sequences: 59808
Number of extensions: 317100
Number of successful extensions: 1318
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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