Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0588
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.       25   2.4  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.6  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   9.8  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   9.8  

>AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.
          Length = 101

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 334 TEPTASHSTTPAIVDN-KVPKKRKKEKSIKDGGVNEKPAN 450
           T P  ++ T P  +D  +V  + K+ +++K+G  N  P N
Sbjct: 17  TAPARNYDTIP--IDRWRVGNRMKEGRNVKNGAANLTPGN 54


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 441 TCKRRDEERSVTCQC*QYKTG 503
           TC  R  E     QC QYKTG
Sbjct: 676 TCAGRCNEFKHCVQCQQYKTG 696


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 518 DTTETPYSEESW*YWTSL 571
           DTT T  +E+ W Y+T++
Sbjct: 244 DTTNTGIAEKVWLYFTNI 261


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
 Frame = +1

Query: 310 TIP--PDPLTTEPTASHSTTPAI 372
           T+P  P+P TTE T   S  P I
Sbjct: 34  TVPATPEPSTTEATEEESPPPKI 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,958
Number of Sequences: 2352
Number of extensions: 9505
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)