BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0588 (590 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.0 AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 22 3.9 DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 6.8 >DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. Length = 828 Score = 22.6 bits (46), Expect = 3.0 Identities = 12/48 (25%), Positives = 19/48 (39%) Frame = +1 Query: 373 VDNKVPKKRKKEKSIKDGGVNEKPANGEMKKDPSLVSANNIKPGDATR 516 +D K K + KDGG +K N + ++ +KP R Sbjct: 219 IDEGKESKTKLSQWRKDGGTVKKKVNYVYRSVDQVLEDGKLKPNKKVR 266 >AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. Length = 238 Score = 22.2 bits (45), Expect = 3.9 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +1 Query: 235 RAIGKHDAVLSNWESPPHE-TDVKINTIPP 321 R+ +HD+V+ SP HE D K +T P Sbjct: 208 RSFSEHDSVMLGEISPHHEYYDSKSSTETP 237 >DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly protein 9 protein. Length = 423 Score = 21.4 bits (43), Expect = 6.8 Identities = 6/10 (60%), Positives = 7/10 (70%) Frame = -3 Query: 324 IWWYCIYFDI 295 IWW +YF I Sbjct: 5 IWWLILYFSI 14 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 149,245 Number of Sequences: 438 Number of extensions: 2949 Number of successful extensions: 6 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17237673 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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