Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0587
         (711 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0814 - 23410278-23411854,23411933-23412166,23412688-234127...    30   1.6  
09_04_0164 + 15265878-15268701,15268782-15269200                       30   2.1  
01_01_0920 + 7264498-7264573,7264705-7264745,7265339-7265408,726...    29   4.8  
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756...    28   6.4  

>12_02_0814 -
           23410278-23411854,23411933-23412166,23412688-23412725,
           23412872-23412948
          Length = 641

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
 Frame = +3

Query: 339 GTTIELTCEAAGSPAPSVHWFKNDSPV-YEYDVESNELIDSSPTSIARISSTLIVTRTPL 515
           G  +EL   A         W KN S V    +VE  E     P    R++ ++ + R PL
Sbjct: 380 GELVELVPPADARVLTMFAWLKNPSAVPTTLEVEIPERAGGGPPCWERMAGSIRIPRAPL 439

Query: 516 RMCT 527
             CT
Sbjct: 440 HKCT 443


>09_04_0164 + 15265878-15268701,15268782-15269200
          Length = 1080

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 396 WFKNDSPVYEYDVESNELIDSSPTSI 473
           W  N + +Y  DVE+N L D  PTSI
Sbjct: 307 WLANCTILYLLDVENNSLADDLPTSI 332


>01_01_0920 +
           7264498-7264573,7264705-7264745,7265339-7265408,
           7265500-7265648,7266143-7266238,7266326-7266396,
           7266510-7266571,7266651-7266714,7267608-7267692,
           7267777-7267903,7268016-7268080,7268739-7268796,
           7268927-7269066,7269624-7269693,7269910-7269981,
           7270188-7270234,7270468-7270566
          Length = 463

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +3

Query: 297 SITQGPLPSYAHTPGTTIELTC--EAAGSPAPSVHWFKNDSPVYE 425
           S  +GP P+  HT   T ++T     A S  P   W K+   +YE
Sbjct: 353 STERGPHPNIQHTENITQDMTARKHLAASVLPGAEWRKDGHLLYE 397


>04_04_1509 -
           34074206-34074398,34074506-34074777,34075411-34075608,
           34076092-34076187,34076318-34076500,34076597-34076799,
           34076887-34077013,34077098-34077292,34077400-34077540,
           34077669-34077812,34077876-34078040,34078776-34078976,
           34079049-34079195,34079275-34079427,34079731-34079833,
           34079954-34080069,34080168-34080349,34080442-34080541,
           34081200-34081527,34081605-34081834,34081979-34082110,
           34082787-34082859,34083274-34083338
          Length = 1248

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 9/30 (30%), Positives = 21/30 (70%)
 Frame = -1

Query: 294 NIYEIHQILLAHHFNTVIDVRKQLNVFIQM 205
           N+Y+  Q+L   ++NT+ D++ ++ VF ++
Sbjct: 850 NLYKQEQVLRKRYYNTIEDMKGKIRVFCRL 879


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,651,528
Number of Sequences: 37544
Number of extensions: 347059
Number of successful extensions: 917
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)