Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0587
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase ...    27   0.44 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   4.1  

>AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase
           protein.
          Length = 259

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -3

Query: 496 MRVEEILAIDVGLESINSLDSTSYS*TGESFLNQCTDGAGDPAASQVNSIVVP-GVCAYD 320
           M+V  IL  +   ++I  +D T     G   +  CT  +G P    ++   +  GV +Y 
Sbjct: 171 MKVNLILRTEEDCQTIGKIDETQICAGGYKNVTGCTADSGGPLTVTIDGEQMQIGVLSY- 229

Query: 319 GRGPC 305
           G  PC
Sbjct: 230 GEKPC 234


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 109 LRESHQYYRAVVRMHLVLLFTVAALLGSC 195
           ++E  +Y   V+    + +FT+A +LG+C
Sbjct: 491 VKEDWKYVALVLDRLFLWIFTIACVLGTC 519


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,093
Number of Sequences: 2352
Number of extensions: 12807
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)