Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0585
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47068-6|CAA87334.2|  272|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    29   3.2  
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    29   3.2  
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   4.2  
Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z83113-10|CAI46598.1|  556|Caenorhabditis elegans Hypothetical p...    27   9.6  
Z83113-9|CAB05548.2|  497|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z73975-5|CAA98278.2|  556|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z73975-4|CAA98279.2|  497|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl...    27   9.6  

>Z47068-6|CAA87334.2|  272|Caenorhabditis elegans Hypothetical
           protein F15G9.5 protein.
          Length = 272

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +1

Query: 529 ELDNYCVLCCGNI*HK 576
           E DNYC LCCGN  H+
Sbjct: 73  EEDNYCYLCCGNSEHQ 88


>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
            K12F2.1 protein.
          Length = 1969

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 22   KSTDELLSQTKKSIDDITTSARRSMDDISSK---AKSTLDDMEKLTKANA 162
            K TD+ LS TKK + D+  S R++  +  S+    +S  D+M    +A A
Sbjct: 954  KKTDQELSDTKKHVQDLELSLRKAEQEKQSRDHNIRSLQDEMANQDEAVA 1003


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
            protein.
          Length = 1969

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 22   KSTDELLSQTKKSIDDITTSARRSMDDISSK---AKSTLDDMEKLTKANA 162
            K TD+ LS TKK + D+  S R++  +  S+    +S  D+M    +A A
Sbjct: 954  KKTDQELSDTKKHVQDLELSLRKAEQEKQSRDHNIRSLQDEMANQDEAVA 1003


>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
           protein F16B12.6 protein.
          Length = 1392

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 177 KRGVICMPLQ--YIYRKRTALMTCHVHLVLVYS 269
           K GVIC P    ++ ++ T   TC  HLV +YS
Sbjct: 840 KLGVICDPQNSTFLLKENTNYKTCPFHLVYLYS 872


>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 29  QMNYYHKQRSQLMTSQHQQEDQWMISHLKQKAHLMIWKN*LKLMPPRGAE-KRSNMHASA 205
           ++++Y K+   L     Q ED+W I   KQ+    I++  +K +  R A+ KR N   S 
Sbjct: 705 EISFYKKKNKDLTNQVLQTEDRWTIEIEKQR---QIFEKEIKTLGIRVADAKRQNDELSE 761

Query: 206 IHISKT 223
           +  SK+
Sbjct: 762 LLESKS 767


>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 29  QMNYYHKQRSQLMTSQHQQEDQWMISHLKQKAHLMIWKN*LKLMPPRGAE-KRSNMHASA 205
           ++++Y K+   L     Q ED+W I   KQ+    I++  +K +  R A+ KR N   S 
Sbjct: 705 EISFYKKKNKDLTNQVLQTEDRWTIEIEKQR---QIFEKEIKTLGIRVADAKRQNDELSE 761

Query: 206 IHISKT 223
           +  SK+
Sbjct: 762 LLESKS 767


>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 29  QMNYYHKQRSQLMTSQHQQEDQWMISHLKQKAHLMIWKN*LKLMPPRGAE-KRSNMHASA 205
           ++++Y K+   L     Q ED+W I   KQ+    I++  +K +  R A+ KR N   S 
Sbjct: 705 EISFYKKKNKDLTNQVLQTEDRWTIEIEKQR---QIFEKEIKTLGIRVADAKRQNDELSE 761

Query: 206 IHISKT 223
           +  SK+
Sbjct: 762 LLESKS 767


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 38  YYHKQRSQLMTSQHQQEDQ 94
           YYH Q+ QL    HQQ+ Q
Sbjct: 177 YYHNQQKQLQQQHHQQQQQ 195


>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/33 (33%), Positives = 24/33 (72%)
 Frame = -2

Query: 158 LALVNFSISSSVLFALDEISSIDLLADVVMSSI 60
           + +V ++  ++V+  L++I+SID LAD+V  ++
Sbjct: 92  IGIVTYNRDATVVADLNKITSIDQLADIVFGAL 124


>Z83113-10|CAI46598.1|  556|Caenorhabditis elegans Hypothetical
           protein K08H10.2b protein.
          Length = 556

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 13  SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDMEK 144
           SA   T +     +K  DD   +A+ + D    K   TLD ++K
Sbjct: 4   SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47


>Z83113-9|CAB05548.2|  497|Caenorhabditis elegans Hypothetical
           protein K08H10.2a protein.
          Length = 497

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 13  SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDMEK 144
           SA   T +     +K  DD   +A+ + D    K   TLD ++K
Sbjct: 4   SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47


>Z73975-5|CAA98278.2|  556|Caenorhabditis elegans Hypothetical
           protein K08H10.2b protein.
          Length = 556

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 13  SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDMEK 144
           SA   T +     +K  DD   +A+ + D    K   TLD ++K
Sbjct: 4   SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47


>Z73975-4|CAA98279.2|  497|Caenorhabditis elegans Hypothetical
           protein K08H10.2a protein.
          Length = 497

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 13  SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDMEK 144
           SA   T +     +K  DD   +A+ + D    K   TLD ++K
Sbjct: 4   SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47


>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
            anchorage protein1 protein.
          Length = 8545

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 22   KSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDMEK 144
            K+T E L++  +S D I     + + D  +KAK  L  +EK
Sbjct: 3222 KATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKELLQALEK 3262



 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 22   KSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDMEK 144
            K+T E L++  +S D I     + + D  +KAK  L  +EK
Sbjct: 4125 KATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKELLQALEK 4165



 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 22   KSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDMEK 144
            K+T E L++  +S D I     + + D  +KAK  L  +EK
Sbjct: 5079 KATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKELLQALEK 5119



 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 22   KSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDMEK 144
            K+T E L++  +S D I     + + D  +KAK  L  +EK
Sbjct: 5982 KATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKELLQALEK 6022



 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 22   KSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDMEK 144
            K+T E L++  +S D I     + + D  +KAK  L  +EK
Sbjct: 6885 KATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKELLQALEK 6925



 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 22   KSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDMEK 144
            K+T E L++  +S D I     + + D  +KAK  L  +EK
Sbjct: 7788 KATVEQLTKLAESSDKIDPQVAKDIKDSKTKAKELLQALEK 7828


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,013,951
Number of Sequences: 27780
Number of extensions: 300882
Number of successful extensions: 715
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)