Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0584
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    25   0.47 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.8  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 385 CPPIYRPRCRLS 420
           CPPIY P C+ S
Sbjct: 33  CPPIYEPSCQYS 44


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 173 PRFLIKYRHLDLSQLRLLPINIMYNYPG*SPGTWQ 277
           P  L+   HL  +    LP N  + +PG  P  WQ
Sbjct: 33  PSQLLMASHLMAASRLSLPTNPAFFHPGLLPLAWQ 67


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 246 LYIMLIGKSLSWDRSRWRYLIRN 178
           L  + I KS  WD  +WR L  N
Sbjct: 93  LTTVTIFKSAFWDVDKWRTLFTN 115


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 148 SPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGV 258
           SPVG   PP +P   +    +P QT     Y+    V
Sbjct: 119 SPVGVALPPTLP-AAAAAALLPPQTAAMAAYLNAAAV 154


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 292 LSLIFHRIQSMQGLHRHP 345
           +SL  H+I SM   H HP
Sbjct: 349 MSLTRHQISSMGHSHAHP 366


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 529 RRSIFLQTGVTEA 491
           RRS+FL++GV  A
Sbjct: 18  RRSVFLESGVNSA 30


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 292 LSLIFHRIQSMQGLHRHP 345
           +SL  H+I SM   H HP
Sbjct: 349 MSLTRHQISSMGHSHAHP 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,530
Number of Sequences: 336
Number of extensions: 3197
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)