Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0584
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 30 1.9
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 30 1.9
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 30 1.9
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 30 1.9
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 30 1.9
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 30 1.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 1.9
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 3.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 29 4.5
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 4.5
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic ... 29 4.5
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 4.5
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 5.9
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 28 5.9
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 7.9
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 7.9
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 7.9
AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical
protein BE10.4 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/83 (30%), Positives = 37/83 (44%)
Frame = +1
Query: 52 HAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTN 231
+AY Q Y + I + + +Q E+ P G P PP P Q + G Q + N
Sbjct: 41 NAYEHQAYQGLQNIHDDLANQ-----YHQELGYPTGPPLPPPPPPQPA-NGYQDPQNYQN 94
Query: 232 QHYVQLPGVESRNLAACPCRLSL 300
HY P + S + A+C R+ L
Sbjct: 95 -HYESPPSLSSASAASCLSRIRL 116
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +1
Query: 19 PLPPITLQEVEH-AYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVS 195
P PP T +EV A + P P +N E+ + P P +PN V
Sbjct: 207 PPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTTAKVETTKPTKAAPPAPTPVPNPVP 266
Query: 196 PPGPIPTQTFTNQHYVQLP 252
P P P T + +P
Sbjct: 267 SPPPPPANTTVTEEKTTVP 285
>Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical
protein K08E3.8 protein.
Length = 441
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +1
Query: 25 PPITLQEVEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIP--NQVSP 198
P + ++EH Y PQQ+ ++ Q+ Q I P P +IP S
Sbjct: 155 PGLPGSQMEHQYPMHLQPQQQTLSRPGSQQSQHIQQPGSIQRPGSVLAPGSIPPGGPASQ 214
Query: 199 PGPIPTQTFTNQHYVQLPG 255
GP Q F VQ PG
Sbjct: 215 TGPQSIQVF-GPGSVQPPG 232
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 76 PQQRPITEV-IGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPT 216
P+ P+ + +G+ NF L + I S + P P P VS P P+ T
Sbjct: 526 PKPAPVQPISLGNINFVALAQQLIASGIKLPLPIVTPPVVSTPAPVIT 573
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +1
Query: 37 LQEVEHAYFAQQYPQQRPITEVIGS--QNFFFLQE---SEIDSPVGTPQPPAIPNQVSPP 201
L +V+ + YP+ P + +I Q+F L E E P+ P PP P Q
Sbjct: 58 LMDVQISVSPPSYPRDHPFSSIIRQKRQSFASLPEWCQCEPTKPICPPGPPGQPGQQGQK 117
Query: 202 GP 207
GP
Sbjct: 118 GP 119
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 145 DSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGVESRNLAACPC 288
+ P G P P P + PGP+ T + PG+ + A CPC
Sbjct: 239 EGPDGLPGPAGPPGKPGMPGPMGTPGGPGE-----PGIPGSDAAYCPC 281
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 76 PQQRPITEV-IGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPT 216
P+ P+ + +G+ NF L + I S + P P P VS P P+ T
Sbjct: 526 PKPAPVQPISLGNINFVALAQQLIASGIKLPLPIVTPPVVSTPAPVIT 573
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +2
Query: 413 ACHARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPVSPVTDKEDDCRKDGPSPELE 592
A A +PSTS+ +S +T S R S + L +SP+SP + D S +
Sbjct: 31 ALKAHQPSTSSGSS--STSSPRPSTPGILSQILSSASSPISPQSAGSSSGASDTMSLCVS 88
Query: 593 NGGDRKGDSQS 625
+ GD + D S
Sbjct: 89 DNGDHESDKLS 99
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 25 PPITLQEVEHAYFAQQYPQQ--RPIT-EVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVS 195
PP+ LQ + AQ+ P++ P+T E I Q I P TP P P V
Sbjct: 253 PPLVLQSLPETPEAQKLPEEPLEPVTPEPIPEAPVPIAQY--IQEPTTTPAPLEAPAPVE 310
Query: 196 PPGPIPTQTFT 228
+PT TF+
Sbjct: 311 NAPNLPTPTFS 321
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 25 PPITLQEVEHAYFAQQYPQQ--RPIT-EVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVS 195
PP+ LQ + AQ+ P++ P+T E I Q I P TP P P V
Sbjct: 253 PPLVLQSLPETPEAQKLPEEPLEPVTPEPIPEAPVPIAQY--IQEPTTTPAPLEAPAPVE 310
Query: 196 PPGPIPTQTFT 228
+PT TF+
Sbjct: 311 NAPNLPTPTFS 321
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 142 IDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQ-HYVQLPGVESRNLAACPCRLSLI 303
+ +PV P P IP V PP P T T + Q +++ G+ + A R ++
Sbjct: 1113 VAAPVPVPTPFTIPPPVPPPPPTATSTQSQQPQFLEGLGMTDNEIVADAIRRGMV 1167
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 148 SPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGVESRNLAACP 285
+P Q + P Q +PP P+P QT Q P V+ A P
Sbjct: 279 NPAPVVQQASAPVQQAPPKPVPQQTPPVQQAPPKPAVQQAPTRAAP 324
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 130 QESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 219
+ES D P GT P P Q PP P P Q
Sbjct: 211 EESLDDKPSGTKMPAQPPPQQHPPPPQPQQ 240
>Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical
protein C39E9.9 protein.
Length = 276
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 112 QNFFFLQESEIDSPVGTPQPPAI---PNQVSPPGPIPTQTFTNQHYVQLPGVE 261
Q+ + + I PVG P PP P + PPGP F H PGVE
Sbjct: 118 QSLIYQRPPCIRCPVGEPGPPGPDGEPGEQGPPGPPGVDNFEVGHDGP-PGVE 169
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGP 207
P G P PP P PPGP
Sbjct: 230 PAGPPGPPGAPGNDGPPGP 248
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 380 SSARQSTAPAAACHARR-PSTSARTSHNATRSRRDSGTRLCYARLQEDTSPVSPVTDKED 556
+SA +P ++ A P+TSA ++ +A T A E T+P + VT E
Sbjct: 1286 TSAPDGVSPTSSATAPEVPTTSASSTPDAVEESGIPSTSKPTAEPLETTAPSTEVTSPEG 1345
Query: 557 DCRKDGPSPELENGGD 604
++ P E G+
Sbjct: 1346 SGTEESTLPPTEGSGE 1361
>AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform d protein.
Length = 1044
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/87 (22%), Positives = 39/87 (44%)
Frame = +2
Query: 362 TYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPVSPV 541
TY P ++ Q P ++ + +PS SA S + + ++ TR + E + P+
Sbjct: 889 TYNPDGCNSYQ---PMSSNQSYKPSISAEESSHTSNAQVQQPTRAIPPHVIEQLAASLPI 945
Query: 542 TDKEDDCRKDGPSPELENGGDRKGDSQ 622
+DK D +K + N + +S+
Sbjct: 946 SDKNDLVKKLSLQDKFFNNNNNNENSE 972
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGP 207
P G P PP P PPGP
Sbjct: 230 PAGPPGPPGAPGNDGPPGP 248
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/73 (28%), Positives = 28/73 (38%)
Frame = +1
Query: 1 PGYPLRPLPPITLQEVEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAI 180
PG P RP+PP + + Y Q P ++I N + + P Q P
Sbjct: 574 PGTPGRPIPPYAMGQ------PPMYHQAGPQGQMIQRMNSYPGNAQQFRPPPQQSQQPIP 627
Query: 181 PNQVSPPGPIPTQ 219
P Q P P P Q
Sbjct: 628 PQQQQQP-PAPPQ 639
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 121 FFLQESEIDSPVGTPQPPAIPNQVSPPGPIP 213
FFLQ + P+ T PP PN PP P P
Sbjct: 811 FFLQYASNSQPLSTLPPPPPPN--PPPAPQP 839
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGP 207
P G P PP P PPGP
Sbjct: 228 PPGPPGPPGAPGNDGPPGP 246
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 103 IGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTN 231
I QN LQ + SP P P V PP P P T N
Sbjct: 493 IEQQNQLMLQHHQFSSPPAAPPPSQQQQVVQPPIP-PAPTTAN 534
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 133 ESEIDSPVGTPQPPAIPNQVSPPGPIPT 216
ES I S + TP P P S P P+P+
Sbjct: 1229 ESGISSSISTPHPEPTPAITSCPPPVPS 1256
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 133 ESEIDSPVGTPQPPAIPNQVSPPGPIPT 216
ES I S + TP P P S P P+P+
Sbjct: 1229 ESGISSSISTPHPEPTPAITSCPPPVPS 1256
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGP 207
P G P PP P PPGP
Sbjct: 223 PPGPPGPPGAPGNDGPPGP 241
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGP 207
P G P PP P PPGP
Sbjct: 223 PPGPPGPPGAPGNDGPPGP 241
>AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical
protein Y43C5A.4 protein.
Length = 218
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 130 QESEIDSPVGTPQP-PAIPNQVSPPGPIP 213
++ + +P G P P PA+P + SP P+P
Sbjct: 140 KKDDFFAPPGAPDPVPAVPVEPSPAPPVP 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,588,542
Number of Sequences: 27780
Number of extensions: 311852
Number of successful extensions: 1887
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1876
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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