BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0583 (695 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_0936 - 22771416-22771702,22772297-22772393,22772951-22773847 77 1e-14 04_04_1643 + 35010877-35010910,35011002-35011147,35011316-350114... 30 1.5 04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 30 2.0 04_04_0600 + 26526667-26527692 29 3.5 02_02_0248 - 8267332-8268276,8268338-8269288 29 3.5 01_03_0056 + 12089404-12090300,12090429-12090581,12090999-120911... 28 6.2 09_01_0137 + 2063881-2063934,2066218-2066448,2066656-2067249,206... 28 8.1 03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 28 8.1 01_05_0657 + 24034198-24036306 28 8.1 >08_02_0936 - 22771416-22771702,22772297-22772393,22772951-22773847 Length = 426 Score = 77.0 bits (181), Expect = 1e-14 Identities = 33/79 (41%), Positives = 51/79 (64%) Frame = +3 Query: 261 KTIELSEKFQCRGQEFYDAMTRIEMVTAFTQGHVKLDPEKGGKFALFGGNVTGEFKELVP 440 KTIE++EKF CR ++ Y+ + FTQ + ++ E GG+F+LF G+++G +EL Sbjct: 220 KTIEMTEKFYCRAKDMYEILMDENRWKGFTQSNARISREVGGQFSLFDGSISGVNEELQE 279 Query: 441 GKRIVQYWRYKQWPEQHYS 497 GK IVQ WR+ WP+ +S Sbjct: 280 GKLIVQKWRFGSWPDGVHS 298 >04_04_1643 + 35010877-35010910,35011002-35011147,35011316-35011441, 35012418-35012558 Length = 148 Score = 30.3 bits (65), Expect = 1.5 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +1 Query: 160 PDNVSTITSGFNKKINMNPIISPQTNKVGCKLIQRQLNYQRNFNVED 300 PD T+ F+ +INM P ++P T V K N+QR + +E+ Sbjct: 79 PDKPPTVR--FHSRINM-PCVNPDTGLVESKKFHMLANWQREYTMEN 122 >04_04_0596 - 26497863-26497913,26498010-26498081,26499015-26499093, 26499440-26499553,26499822-26499871,26500353-26500398, 26501100-26501719 Length = 343 Score = 29.9 bits (64), Expect = 2.0 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 27 ESESIYASCRAGRDPKTTPRVYSKSKRRVLKRPHSAKERR 146 ESES Y+ C AG + +T + +RR +R +E R Sbjct: 109 ESESSYSDCSAGSESETDSEEERRRRRRRRRRKEREEEER 148 >04_04_0600 + 26526667-26527692 Length = 341 Score = 29.1 bits (62), Expect = 3.5 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 Query: 354 GHVKLDPEKGGKFALFGGNVTGEFKELVPGKRIVQYWRYKQWP 482 G VK + + L G NV G+ +EL PG + +W K P Sbjct: 263 GEVKAVEHRWNQHGLGGDNVAGQCRELHPGPVSLLHWSGKGKP 305 >02_02_0248 - 8267332-8268276,8268338-8269288 Length = 631 Score = 29.1 bits (62), Expect = 3.5 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = +2 Query: 347 HSGSCKARSRERWKICLIWW*CYWRI*RTRPRKE 448 H G CK + + + +IC + W WR +R + E Sbjct: 304 HRGHCKLQRQSQGRICALLWLADWRFVTSRIQPE 337 >01_03_0056 + 12089404-12090300,12090429-12090581,12090999-12091157, 12091575-12091734,12092185-12092201,12092682-12092798, 12092914-12093303 Length = 630 Score = 28.3 bits (60), Expect = 6.2 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Frame = +2 Query: 545 LKQDLVPVAEVEKTRDNWQRYYFDSIKRAFG---FGA 646 L + VP ++KT NW + FD R F FGA Sbjct: 450 LMSEFVPGFPIDKTDPNWSNFLFDEPTRKFNLIDFGA 486 >09_01_0137 + 2063881-2063934,2066218-2066448,2066656-2067249, 2067980-2068639,2068910-2069164 Length = 597 Score = 27.9 bits (59), Expect = 8.1 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = -3 Query: 681 LISLRVCM-DHRNAPNPKARLILSK*YRCQL-SRVFSTSATGTR 556 +++L+ M D +N P P +I S+ RC+L S + T+ TGT+ Sbjct: 156 VMALKTSMEDVKNCPGPHPPIIESRASRCELQSAPWPTNRTGTK 199 >03_05_0434 + 24252994-24253449,24254791-24254877,24255450-24255748, 24256146-24256383,24256907-24257441,24257527-24257729, 24258311-24258520 Length = 675 Score = 27.9 bits (59), Expect = 8.1 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +2 Query: 515 EEKDDHT-LVRLKQDLVPVAEVEKTRDN 595 E K DH+ L K+DL+PV+E E T DN Sbjct: 430 EAKVDHSDLTSEKEDLLPVSEKECTFDN 457 >01_05_0657 + 24034198-24036306 Length = 702 Score = 27.9 bits (59), Expect = 8.1 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +2 Query: 590 DNWQRYYFDSIKRAFGFGAFL*SMHTRREIRF 685 DNW+R+YF+ + +F G + S + R+ Sbjct: 94 DNWKRFYFEQLIHSFWVGWLMVSSGAGSDFRY 125 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,289,658 Number of Sequences: 37544 Number of extensions: 330625 Number of successful extensions: 769 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 746 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 769 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1780264028 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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