Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0583
(695 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12050.2 68416.m01497 Aha1 domain-containing protein contains... 71 1e-12
At3g12050.1 68416.m01496 Aha1 domain-containing protein contains... 71 1e-12
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 30 1.3
At4g02130.2 68417.m00285 glycosyl transferase family 8 protein l... 28 5.1
At4g02130.1 68417.m00284 glycosyl transferase family 8 protein l... 28 5.1
At1g60240.1 68414.m06784 apical meristem formation protein-relat... 28 5.1
At3g29410.1 68416.m03695 terpene synthase/cyclase family protein... 28 6.8
At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel... 27 9.0
At1g63350.1 68414.m07161 disease resistance protein (CC-NBS-LRR ... 27 9.0
At1g13330.1 68414.m01547 expressed protein similar to nuclear re... 27 9.0
>At3g12050.2 68416.m01497 Aha1 domain-containing protein contains
Pfam PF05146: Aha1 domain; similar to Protein C14orf3
(HSPC322) (Swiss-Prot:O95433) [Homo sapiens]
Length = 321
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = +3
Query: 261 KTIELSEKFQCRGQEFYDAMTRIEMVTAFTQGHVKLDPEKGGKFALFGGNVTGEFKELVP 440
KTI ++EKF CR ++ Y+ + FTQ + K+ + G ++F G+VTG EL
Sbjct: 185 KTITMTEKFNCRARDLYEILMDENRWKGFTQSNAKISKDVNGPISVFDGSVTGMNLELEE 244
Query: 441 GKRIVQYWRYKQWPEQHYSEVTLILK 518
GK IVQ WR+ WP+ S V ++ +
Sbjct: 245 GKLIVQKWRFGSWPDGLDSTVKIVFE 270
>At3g12050.1 68416.m01496 Aha1 domain-containing protein contains
Pfam PF05146: Aha1 domain; similar to Protein C14orf3
(HSPC322) (Swiss-Prot:O95433) [Homo sapiens]
Length = 360
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = +3
Query: 261 KTIELSEKFQCRGQEFYDAMTRIEMVTAFTQGHVKLDPEKGGKFALFGGNVTGEFKELVP 440
KTI ++EKF CR ++ Y+ + FTQ + K+ + G ++F G+VTG EL
Sbjct: 224 KTITMTEKFNCRARDLYEILMDENRWKGFTQSNAKISKDVNGPISVFDGSVTGMNLELEE 283
Query: 441 GKRIVQYWRYKQWPEQHYSEVTLILK 518
GK IVQ WR+ WP+ S V ++ +
Sbjct: 284 GKLIVQKWRFGSWPDGLDSTVKIVFE 309
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +1
Query: 40 FMHHVGREEIRKQLQEYIRSLK--EEF-SKGLILPK 138
F G+E I+++LQE +R LK EEF +KG+ PK
Sbjct: 315 FDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPK 350
>At4g02130.2 68417.m00285 glycosyl transferase family 8 protein low
similarity to lgtC of Neisseria sp., GenBank accession
number U14554, U65788; contains Pfam glycosyl
transferase family 8 domain PF01501
Length = 346
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 258 TKTIELSEKFQCRGQEFYDAMTRIEMVTAFTQGHVKLDPEKGGKFALFGGNVTGEFKELV 437
TK IE + Q R + Y+ + + F+ GHV + + L G NV G ++L
Sbjct: 248 TKRIEKWMEIQ-RRERIYELGSLPPFLLVFS-GHVAPISHRWNQHGLGGDNVRGSCRDLH 305
Query: 438 PGKRIVQYW 464
PG + +W
Sbjct: 306 PGPVSLLHW 314
>At4g02130.1 68417.m00284 glycosyl transferase family 8 protein low
similarity to lgtC of Neisseria sp., GenBank accession
number U14554, U65788; contains Pfam glycosyl
transferase family 8 domain PF01501
Length = 346
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 258 TKTIELSEKFQCRGQEFYDAMTRIEMVTAFTQGHVKLDPEKGGKFALFGGNVTGEFKELV 437
TK IE + Q R + Y+ + + F+ GHV + + L G NV G ++L
Sbjct: 248 TKRIEKWMEIQ-RRERIYELGSLPPFLLVFS-GHVAPISHRWNQHGLGGDNVRGSCRDLH 305
Query: 438 PGKRIVQYW 464
PG + +W
Sbjct: 306 PGPVSLLHW 314
>At1g60240.1 68414.m06784 apical meristem formation protein-related
contains similarity to CUC1 [Arabidopsis thaliana]
gi|12060422|dbj|BAB20598 and NAM [Petunia x hybrida]
gi|1279640|emb|CAA63101
Length = 175
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 33 ESIYASCRAGRDPKTTPRVYSKSKRRVLKRPHSAKERRIFRQT 161
+ +Y C R PK+ + K KRRV R A E F T
Sbjct: 102 KKVYKFCETDRKPKSVFKFLEKEKRRVRDRRIWAMEEYRFAST 144
>At3g29410.1 68416.m03695 terpene synthase/cyclase family protein
similar to terpene synthase GB:CAA72074 from
[Arabidopsis thaliana], contains Pfam profile: PF01397
terpene synthase family
Length = 603
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 7 SNGDEAQRVKAFM--HHVGRE----EIRKQLQEYIRSLKEEFSKGLILPKKGESSVKPDN 168
S G+ A V +M H V +E E+RK +E + + EEF +P+ + V+P N
Sbjct: 510 SRGEVANGVNCYMKQHGVTKEAAVEELRKMERESYKIMIEEFMTSKAMPR--QILVRPVN 567
Query: 169 VSTITSGFNKK 201
++ + F K+
Sbjct: 568 IARVMDLFYKE 578
>At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC1) almost identical
to cyclic nucleotide-regulated ion channel 1 pir:T51354,
GI:11357236 from [Arabidopsis thaliana]
Length = 716
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 444 KRIVQYWRYKQWPEQHYSEVTLILKRRMTTL*SDSNKTLCLSLRLRRPV 590
KRI +Y +YK W E + +L L D + LCL+L +R P+
Sbjct: 439 KRIRRYEQYK-WQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPM 486
>At1g63350.1 68414.m07161 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 898
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 61 EEIRKQLQEYIRSLKEEFSKGLILPKKGESSVKPDNVSTITSGFNKKIN 207
EE++ + + +R LK E +G L GE V + V TI S N +N
Sbjct: 42 EELKAKRDDLLRKLKREEDRG--LQTLGEIKVWLNRVETIESRVNDLLN 88
>At1g13330.1 68414.m01547 expressed protein similar to nuclear
receptor coactivator GT198 (GI:16506273) {Rattus
norvegicus}; similar to TBP-1 interacting protein
(GI:7328534) [Homo sapiens]
Length = 226
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +1
Query: 4 KSNGDEAQRVKAFMHHVGREEIRKQLQEYIRSLKEEFSKGLILPKKGESSVKPDNVSTIT 183
K+ D +K+ ++ EEI+++ + + +KE K L+ ++G + V+P++ +
Sbjct: 100 KTISDVESEIKSLQSNLTLEEIQEKDAKLRKEVKEMEEK-LVKLREGITLVRPEDKKAVE 158
Query: 184 SGFNKKIN 207
+ KIN
Sbjct: 159 DMYADKIN 166
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,430,784
Number of Sequences: 28952
Number of extensions: 284896
Number of successful extensions: 816
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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